RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
USF1-206ENST00000491629 AACSQ86V21 672 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 MB21D1Q8N884 522 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 MYH4Q9Y623 1939 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 PRKAB2O43741 272 aa16.04■□□□□ 0.16
USF1-206ENST00000491629 ZNF865P0CJ78 1059 aaPredicted RBP16.04■□□□□ 0.16
USF1-206ENST00000491629 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
USF1-206ENST00000491629 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
USF1-206ENST00000491629 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
USF1-206ENST00000491629 PRDM6Q9NQX0 595 aa16.04■□□□□ 0.16
USF1-206ENST00000491629 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
USF1-206ENST00000491629 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 KIAA0355O15063 1070 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 CHGBP05060 677 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 CLTBP09497 229 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 FOSL2P15408 326 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 GRIN2CQ14957 1233 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 TACC3Q9Y6A5 838 aa16.03■□□□□ 0.16
USF1-206ENST00000491629 ADAMTS4O75173 837 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 FCER1AP12319 257 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 ICA1Q05084 483 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
USF1-206ENST00000491629 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 RNPC3Q96LT9 517 aaKnown RBP16.02■□□□□ 0.16
USF1-206ENST00000491629 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 SLC5A4Q9NY91 659 aa16.02■□□□□ 0.16
USF1-206ENST00000491629 XIRP2A4UGR9 3374 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 RARBP10826 455 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
USF1-206ENST00000491629 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
USF1-206ENST00000491629 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
USF1-206ENST00000491629 TRANK1O15050 2925 aa16■□□□□ 0.15
USF1-206ENST00000491629 TMEM265A0A087WTH1 108 aa16■□□□□ 0.15
USF1-206ENST00000491629 GOLIM4O00461 696 aa16■□□□□ 0.15
USF1-206ENST00000491629 WDR46O15213 610 aaKnown RBP16■□□□□ 0.15
USF1-206ENST00000491629 PQBP1O60828 265 aaKnown RBP16■□□□□ 0.15
USF1-206ENST00000491629 SLC25A27O95847 323 aa16■□□□□ 0.15
USF1-206ENST00000491629 EEF2P13639 858 aaKnown RBP16■□□□□ 0.15
USF1-206ENST00000491629 CDK8P49336 464 aa16■□□□□ 0.15
USF1-206ENST00000491629 CCSAPQ6IQ19 270 aaPredicted RBP16■□□□□ 0.15
USF1-206ENST00000491629 C16orf59Q7L2K0 433 aa16■□□□□ 0.15
USF1-206ENST00000491629 MMP19Q99542 508 aa16■□□□□ 0.15
USF1-206ENST00000491629 SWAP70Q9UH65 585 aa16■□□□□ 0.15
USF1-206ENST00000491629 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 VWA5AO00534 786 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 ADCY6O43306 1168 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 RAG1P15918 1043 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 DNAJB2P25686 324 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 TTF1Q15361 905 aaPredicted RBP15.99■□□□□ 0.15
USF1-206ENST00000491629 C12orf60Q5U649 245 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 ANKRD33Q7Z3H0 272 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 KLHDC9Q8NEP7 349 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
USF1-206ENST00000491629 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
USF1-206ENST00000491629 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.99■□□□□ 0.15
USF1-206ENST00000491629 ARHGEF10LQ9HCE6 1279 aa15.99■□□□□ 0.15
USF1-206ENST00000491629 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
USF1-206ENST00000491629 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 MBD4O95243 580 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
USF1-206ENST00000491629 STAT3P40763 770 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 FPGSQ05932 587 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 C16orf86Q6ZW13 317 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 RNF180Q86T96 592 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 ERC1Q8IUD2 1116 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
USF1-206ENST00000491629 TOX2Q96NM4 488 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
USF1-206ENST00000491629 TMEM39AQ9NV64 488 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 TBX21Q9UL17 535 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 PPP1R9AQ9ULJ8 1098 aa15.98■□□□□ 0.15
USF1-206ENST00000491629 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
USF1-206ENST00000491629 USP17L12C9JPN9 530 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 USP17L21D6R901 530 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 AKR1A1P14550 325 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 ADD2P35612 726 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 ACLYP53396 1101 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 FAM83BQ5T0W9 1011 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 ZNF576Q9H609 170 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 RIPK3Q9Y572 518 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 LCTP09848 1927 aa15.97■□□□□ 0.15
USF1-206ENST00000491629 ZBED9Q6R2W3 1325 aa15.96■□□□□ 0.15
USF1-206ENST00000491629 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.96■□□□□ 0.15
USF1-206ENST00000491629 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms