RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 DYNLL2Q96FJ2 89 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZBTB40Q9NUA8 1239 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 RCAN3Q9UKA8 241 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 PHF24Q9UPV7 400 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 PRKAB2O43741 272 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 CDK8P49336 464 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 SMAD3P84022 425 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 TMEM132BQ14DG7 1078 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 SHHQ15465 462 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZNF792Q3KQV3 632 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 NCAPG2Q86XI2 1143 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 REPS2Q8NFH8 660 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 HAUS7Q99871 368 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 ARMT1Q9H993 441 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 PDLIM7Q9NR12 457 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZNF214Q9UL59 606 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 ATP11BQ9Y2G3 1177 aa10.18□□□□□ -0.78
APOBEC3F-204ENST00000491387 UNC80Q8N2C7 3258 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TMEM265A0A087WTH1 108 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TRIM43BA6NCK2 446 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 USP17L21D6R901 530 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 VWA5AO00534 786 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 SMARCA5O60264 1052 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 MBD4O95243 580 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 ADCYAP1R1P41586 468 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 PLS1Q14651 629 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TRIM60Q495X7 471 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 PRAMEF19Q5SWL8 479 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 CLEC10AQ8IUN9 316 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 MSL3Q8N5Y2 521 aaKnown RBP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TRIM43Q96BQ3 446 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TOX2Q96NM4 488 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 PPP1R9AQ9ULJ8 1098 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
APOBEC3F-204ENST00000491387 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 ATP2A1O14983 1001 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 KIAA0355O15063 1070 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZNF865P0CJ78 1059 aaPredicted RBP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 RARBP10826 455 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 STAT3P40763 770 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 TLE2Q04725 743 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 KCTD2Q14681 263 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 CTR9Q6PD62 1173 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 RNF180Q86T96 592 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 BADQ92934 168 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 MMP19Q99542 508 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 BOLA2Q9H3K6 86 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 SEMA6BQ9H3T3 888 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 CHMP4BQ9H444 224 aaKnown RBP10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 XPNPEP3Q9NQH7 507 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 TACC3Q9Y6A5 838 aa10.16□□□□□ -0.78
APOBEC3F-204ENST00000491387 CYP2D7A0A087X1C5 515 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 AKR1A1P14550 325 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 ANO1Q5XXA6 986 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 CCSAPQ6IQ19 270 aaPredicted RBP10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 ZSCAN25Q6NSZ9 544 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 MAMDC4Q6UXC1 1216 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 ANKRD33Q7Z3H0 272 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 CDX2Q99626 313 aaPredicted RBP10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 FBXO28Q9NVF7 368 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 SYNPO2Q9UMS6 1093 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 MCM3APO60318 1980 aa10.15□□□□□ -0.78
APOBEC3F-204ENST00000491387 NCOR1O75376 2440 aa10.15□□□□□ -0.79
APOBEC3F-204ENST00000491387 SYNGAP1Q96PV0 1343 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 DNAJC25-GNG10A0A024R161 153 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 PGK2P07205 417 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 CLTBP09497 229 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 TAL1P17542 331 aaPredicted RBP10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 ITGB8P26012 769 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 CST5P28325 142 aaPredicted RBP10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 ZNF467Q7Z7K2 595 aaPredicted RBP10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 KLHDC9Q8NEP7 349 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 MKL1Q969V6 931 aa10.14□□□□□ -0.79
APOBEC3F-204ENST00000491387 FERMT2Q96AC1 680 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms