RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 IVNS1ABPQ9Y6Y0 642 aa14.17□□□□□ -0.14
ACTN4-206ENST00000489451 SMCHD1A6NHR9 2005 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 EEF2P13639 858 aaKnown RBP14.16□□□□□ -0.14
ACTN4-206ENST00000489451 ATP2B2Q01814 1243 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 TMEM132BQ14DG7 1078 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 ZNF697Q5TEC3 545 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 ANO1Q5XXA6 986 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 OLFML2BQ68BL8 750 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.16□□□□□ -0.144e-6■■■■□ 21.2
ACTN4-206ENST00000489451 HOXC10Q9NYD6 342 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
ACTN4-206ENST00000489451 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
ACTN4-206ENST00000489451 FLOT1O75955 427 aa14.15□□□□□ -0.14
ACTN4-206ENST00000489451 PRAMEF19Q5SWL8 479 aa14.15□□□□□ -0.14
ACTN4-206ENST00000489451 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
ACTN4-206ENST00000489451 CCDC17Q96LX7 622 aa14.15□□□□□ -0.14
ACTN4-206ENST00000489451 STRBPQ96SI9 672 aaKnown RBP14.15□□□□□ -0.14
ACTN4-206ENST00000489451 SENP6Q9GZR1 1112 aaPredicted RBP14.15□□□□□ -0.14
ACTN4-206ENST00000489451 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
ACTN4-206ENST00000489451 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
ACTN4-206ENST00000489451 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 MYH4Q9Y623 1939 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 POTEB2H3BUK9 544 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 DNM1LO00429 736 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 STRNO43815 780 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 RASA1P20936 1047 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 CNGA1P29973 690 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-206ENST00000489451 MDM2Q00987 491 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-206ENST00000489451 GJC2Q5T442 439 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-206ENST00000489451 DPP9Q86TI2 863 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 ZNF214Q9UL59 606 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-206ENST00000489451 PRUNE2Q8WUY3 3088 aa14.14□□□□□ -0.15
ACTN4-206ENST00000489451 MSCO60682 206 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 PLS1Q14651 629 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 KBTBD3Q8NAB2 608 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 MROH8Q9H579 483 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 DCTPP1Q9H773 170 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
ACTN4-206ENST00000489451 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 M0R2C6 588 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 VWA5AO00534 786 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 SEPT4O43236 478 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 SBK1Q52WX2 424 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 FAM47AQ5JRC9 791 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
ACTN4-206ENST00000489451 RIOX2Q8IUF8 465 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 NUP88Q99567 741 aaPredicted RBP14.12□□□□□ -0.15
ACTN4-206ENST00000489451 SH2D4AQ9H788 454 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 ARPP21Q9UBL0 812 aaPredicted RBP14.12□□□□□ -0.15
ACTN4-206ENST00000489451 PPP1R9AQ9ULJ8 1098 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 TTC28Q96AY4 2481 aa14.12□□□□□ -0.15
ACTN4-206ENST00000489451 PGK2P07205 417 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 TAL1P17542 331 aaPredicted RBP14.11□□□□□ -0.15
ACTN4-206ENST00000489451 RTP1P59025 263 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 SNX17Q15036 470 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 ZNF792Q3KQV3 632 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 OTUD7AQ8TE49 926 aaPredicted RBP14.11□□□□□ -0.15
ACTN4-206ENST00000489451 APPBP2Q92624 585 aa14.11□□□□□ -0.15
ACTN4-206ENST00000489451 CDX2Q99626 313 aaPredicted RBP14.11□□□□□ -0.15
ACTN4-206ENST00000489451 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
ACTN4-206ENST00000489451 LRRC41Q15345 812 aa14.1□□□□□ -0.15
ACTN4-206ENST00000489451 ZSCAN25Q6NSZ9 544 aa14.1□□□□□ -0.15
ACTN4-206ENST00000489451 SLC39A5Q6ZMH5 540 aa14.1□□□□□ -0.15
ACTN4-206ENST00000489451 LENG1Q96BZ8 264 aaPredicted RBP14.1□□□□□ -0.15
ACTN4-206ENST00000489451 RIPK3Q9Y572 518 aa14.1□□□□□ -0.15
ACTN4-206ENST00000489451 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
ACTN4-206ENST00000489451 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 FOXP2O15409 715 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 GPAA1O43292 621 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 SLC25A27O95847 323 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 NDUFB10O96000 172 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
ACTN4-206ENST00000489451 FCER1AP12319 257 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 GIMAP6Q6P9H5 292 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 PI4K2BQ8TCG2 481 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 SEC62Q99442 399 aaKnown RBP14.09□□□□□ -0.15
ACTN4-206ENST00000489451 MMP19Q99542 508 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 MCM3APO60318 1980 aa14.09□□□□□ -0.15
ACTN4-206ENST00000489451 F5H6K3 240 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 RNF113AO15541 343 aaKnown RBP14.08□□□□□ -0.16
ACTN4-206ENST00000489451 STAT3P40763 770 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 ADCYAP1R1P41586 468 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 KLRC3Q07444 240 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 TRIM60Q495X7 471 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 AMOTL1Q8IY63 956 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms