RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 SLC4A4Q9Y6R1 1079 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 MYH7P12883 1935 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 ZNFX1Q9P2E3 1918 aaKnown RBP14.33□□□□□ -0.12
SFXN3-207ENST00000489434 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
SFXN3-207ENST00000489434 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 DIEXFQ68CQ4 756 aaKnown RBP14.32□□□□□ -0.12
SFXN3-207ENST00000489434 FAM109BQ6ICB4 259 aaPredicted RBP14.32□□□□□ -0.12
SFXN3-207ENST00000489434 SLC39A5Q6ZMH5 540 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 MMP19Q99542 508 aa14.32□□□□□ -0.12
SFXN3-207ENST00000489434 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
SFXN3-207ENST00000489434 CYP2D7A0A087X1C5 515 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 RARBP10826 455 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 ADCYAP1R1P41586 468 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 TMEM132BQ14DG7 1078 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 RIOX2Q8IUF8 465 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
SFXN3-207ENST00000489434 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
SFXN3-207ENST00000489434 STAT3P40763 770 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 LRRC41Q15345 812 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 SLFNL1Q499Z3 407 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 RNF180Q86T96 592 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 FERMT2Q96AC1 680 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 XPNPEP3Q9NQH7 507 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
SFXN3-207ENST00000489434 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
SFXN3-207ENST00000489434 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
SFXN3-207ENST00000489434 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 VWA5AO00534 786 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 SNX17Q15036 470 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 ZNF697Q5TEC3 545 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 FBXO28Q9NVF7 368 aa14.29□□□□□ -0.12
SFXN3-207ENST00000489434 CTDP1Q9Y5B0 961 aaPredicted RBP14.29□□□□□ -0.12
SFXN3-207ENST00000489434 PGK2P07205 417 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 C1orf53Q5VUE5 145 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
SFXN3-207ENST00000489434 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 ECHDC1Q9NTX5 307 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 TACC3Q9Y6A5 838 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
SFXN3-207ENST00000489434 PLXNA1Q9UIW2 1896 aa14.27□□□□□ -0.12
SFXN3-207ENST00000489434 AKR1A1P14550 325 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 TLE2Q04725 743 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 SBK1Q52WX2 424 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
SFXN3-207ENST00000489434 BADQ92934 168 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 DDX11Q96FC9 970 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 STRBPQ96SI9 672 aaKnown RBP14.27□□□□□ -0.13
SFXN3-207ENST00000489434 PDLIM7Q9NR12 457 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 ZNF214Q9UL59 606 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-207ENST00000489434 LTBP2Q14767 1821 aa14.27□□□□□ -0.13
SFXN3-207ENST00000489434 MINDY4BA8MYZ0 360 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 SMIM22K7EJ46 135 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 ZFYP08048 801 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-207ENST00000489434 SHHQ15465 462 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 LRRFIP1Q32MZ4 808 aaKnown RBP14.26□□□□□ -0.13
SFXN3-207ENST00000489434 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 SNRNP48Q6IEG0 339 aaKnown RBP14.26□□□□□ -0.13
SFXN3-207ENST00000489434 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
SFXN3-207ENST00000489434 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
SFXN3-207ENST00000489434 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 F5H6K3 240 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 SMARCA5O60264 1052 aaPredicted RBP14.25□□□□□ -0.13
SFXN3-207ENST00000489434 ZBED4O75132 1171 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 PGK1P00558 417 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 CHGBP05060 677 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 CLTBP09497 229 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 GNAT2P19087 354 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 RASA1P20936 1047 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 KLRC3Q07444 240 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
SFXN3-207ENST00000489434 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 GUCD1Q96NT3 240 aa14.25□□□□□ -0.13
SFXN3-207ENST00000489434 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
SFXN3-207ENST00000489434 GSG1L2A8MUP6 293 aa14.24□□□□□ -0.13
SFXN3-207ENST00000489434 DCDC2CA8MYV0 355 aa14.24□□□□□ -0.13
SFXN3-207ENST00000489434 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms