RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
SNX17-207ENST00000489402 ATG4CQ96DT6 458 aa11.27□□□□□ -0.61
SNX17-207ENST00000489402 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
SNX17-207ENST00000489402 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
SNX17-207ENST00000489402 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
SNX17-207ENST00000489402 USP17L12C9JPN9 530 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 USP17L21D6R901 530 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 SMARCA5O60264 1052 aaPredicted RBP11.26□□□□□ -0.61
SNX17-207ENST00000489402 SLC25A27O95847 323 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 IGHA2P01877 340 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 CDK8P49336 464 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 HAUS7Q99871 368 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 MTMR10Q9NXD2 777 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
SNX17-207ENST00000489402 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
SNX17-207ENST00000489402 RAD21O60216 631 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 COBLO75128 1261 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 KCTD2Q14681 263 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 PRAMEF19Q5SWL8 479 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
SNX17-207ENST00000489402 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 MMP19Q99542 508 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 PRDM5Q9NQX1 630 aaPredicted RBP11.25□□□□□ -0.61
SNX17-207ENST00000489402 ARPP21Q9UBL0 812 aaPredicted RBP11.25□□□□□ -0.61
SNX17-207ENST00000489402 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
SNX17-207ENST00000489402 PLXNA1Q9UIW2 1896 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
SNX17-207ENST00000489402 COPB2P35606 906 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 SLC39A5Q6ZMH5 540 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 RIOX2Q8IUF8 465 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 PRUNE2Q8WUY3 3088 aa11.24□□□□□ -0.61
SNX17-207ENST00000489402 VCANP13611 3396 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 RARBP10826 455 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 FAM47AQ5JRC9 791 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 FAM109BQ6ICB4 259 aaPredicted RBP11.23□□□□□ -0.61
SNX17-207ENST00000489402 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
SNX17-207ENST00000489402 VWA5AO00534 786 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 PGK2P07205 417 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 STAT3P40763 770 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 ADCYAP1R1P41586 468 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 SNX17Q15036 470 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 LRRC41Q15345 812 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 RNF180Q86T96 592 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 FERMT2Q96AC1 680 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNX17-207ENST00000489402 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
SNX17-207ENST00000489402 XPNPEP3Q9NQH7 507 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
SNX17-207ENST00000489402 PPP1R9AQ9ULJ8 1098 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 ADAMTS5Q9UNA0 930 aa11.22□□□□□ -0.61
SNX17-207ENST00000489402 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
SNX17-207ENST00000489402 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.61
SNX17-207ENST00000489402 ROBO3Q96MS0 1386 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 AKR1A1P14550 325 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 TINF2Q9BSI4 451 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 MKNK2Q9HBH9 465 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 PDLIM7Q9NR12 457 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 ECHDC1Q9NTX5 307 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 RCAN3Q9UKA8 241 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
SNX17-207ENST00000489402 CNPY2Q9Y2B0 182 aa11.21□□□□□ -0.61
SNX17-207ENST00000489402 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
SNX17-207ENST00000489402 SMCHD1A6NHR9 2005 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 MYH4Q9Y623 1939 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
SNX17-207ENST00000489402 SHHQ15465 462 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 GIMAP6Q6P9H5 292 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 BADQ92934 168 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 DDX11Q96FC9 970 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
SNX17-207ENST00000489402 TEX13BQ9BXU2 312 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
SNX17-207ENST00000489402 MINDY4BA8MYZ0 360 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms