RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RWDD1Q9H446 243 aaPredicted RBP27.43■■□□□ 1.98
COL9A3-213ENST00000489045 IGKV6D-41A0A0C4DH26 115 aa27.42■■□□□ 1.98
COL9A3-213ENST00000489045 HOXC6P09630 235 aa27.42■■□□□ 1.98
COL9A3-213ENST00000489045 SMC5Q8IY18 1101 aa27.42■■□□□ 1.98
COL9A3-213ENST00000489045 FOXP2O15409 715 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 ADORA2AP29274 412 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 PPARAQ07869 468 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 TMEM132BQ14DG7 1078 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 HABP4Q5JVS0 413 aaKnown RBP27.41■■□□□ 1.98
COL9A3-213ENST00000489045 MFSD14CQ5VZR4 134 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 NECAB2Q7Z6G3 386 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 MROH8Q9H579 483 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 OGDHLQ9ULD0 1010 aa27.41■■□□□ 1.98
COL9A3-213ENST00000489045 STRNO43815 780 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 PDE4BQ07343 736 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 B4GALNT3Q6L9W6 998 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 NCAPG2Q86XI2 1143 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 CEP95Q96GE4 821 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 NUP88Q99567 741 aaPredicted RBP27.4■■□□□ 1.98
COL9A3-213ENST00000489045 CLIP2Q9UDT6 1046 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 PPP1R9AQ9ULJ8 1098 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 ADAMTS5Q9UNA0 930 aa27.4■■□□□ 1.98
COL9A3-213ENST00000489045 PLIN4Q96Q06 1357 aa27.39■■□□□ 1.98
COL9A3-213ENST00000489045 SLC3A2P08195 630 aaKnown RBP27.39■■□□□ 1.98
COL9A3-213ENST00000489045 MNX1P50219 401 aaPredicted RBP27.39■■□□□ 1.98
COL9A3-213ENST00000489045 DPP9Q86TI2 863 aa27.39■■□□□ 1.98
COL9A3-213ENST00000489045 PLXNA1Q9UIW2 1896 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 F5H6K3 240 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 NDUFB10O96000 172 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 IGHDP01880 384 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 KLRC3Q07444 240 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 MTMR4Q9NYA4 1195 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 COLQQ9Y215 455 aaPredicted RBP27.38■■□□□ 1.97
COL9A3-213ENST00000489045 NR2E3Q9Y5X4 410 aa27.38■■□□□ 1.97
COL9A3-213ENST00000489045 VWA5AO00534 786 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 TSPY3P0CV98 308 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 TSPY8P0CW00 308 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 CYP2C19P33261 490 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 VPS53Q5VIR6 699 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 LHX8Q68G74 356 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 NBPF3Q9H094 633 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 HELLSQ9NRZ9 838 aa27.37■■□□□ 1.97
COL9A3-213ENST00000489045 EVI5O60447 810 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 COBLO75128 1261 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 SLC25A27O95847 323 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 FAM47AQ5JRC9 791 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 REPS2Q8NFH8 660 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 NEDD1Q8NHV4 660 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 FAM227BQ96M60 508 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 SLF1Q9BQI6 1058 aa27.36■■□□□ 1.97
COL9A3-213ENST00000489045 A0A0D9SFI3 127 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 TTLL1O95922 423 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 IGHA2P01877 340 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 TFAP4Q01664 338 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 CTDSPL2Q05D32 466 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 CHD1LQ86WJ1 897 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 ABRAQ8N0Z2 381 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 LRRC47Q8N1G4 583 aaKnown RBP27.35■■□□□ 1.97
COL9A3-213ENST00000489045 MKL1Q969V6 931 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 C11orf49Q9H6J7 331 aa27.35■■□□□ 1.97
COL9A3-213ENST00000489045 ZNF214Q9UL59 606 aaPredicted RBP27.35■■□□□ 1.97
COL9A3-213ENST00000489045 TRIM6-TRIM34B2RNG4 842 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 STAT3P40763 770 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 OLFML2BQ68BL8 750 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 RIOX2Q8IUF8 465 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 SLC5A4Q9NY91 659 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.34■■□□□ 1.97
COL9A3-213ENST00000489045 TRIOBPQ9H2D6 2365 aa27.34■■□□□ 1.97
COL9A3-213ENST00000489045 FCER1AP12319 257 aa27.33■■□□□ 1.97
COL9A3-213ENST00000489045 NUCB1Q02818 461 aa27.33■■□□□ 1.97
COL9A3-213ENST00000489045 CHRDL2Q6WN34 429 aa27.33■■□□□ 1.97
COL9A3-213ENST00000489045 SYNPO2Q9UMS6 1093 aa27.33■■□□□ 1.97
COL9A3-213ENST00000489045 CYBAP13498 195 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 CNGA1P29973 690 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 NMIQ13287 307 aaPredicted RBP27.32■■□□□ 1.96
COL9A3-213ENST00000489045 MCMDC2Q4G0Z9 681 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 TICAM2Q86XR7 235 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 GMCL1P1Q8NEA9 526 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 TRPV1Q8NER1 839 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 RILPL2Q969X0 211 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 MMP19Q99542 508 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 INCENPQ9NQS7 918 aa27.32■■□□□ 1.96
COL9A3-213ENST00000489045 DDX20Q9UHI6 824 aaKnown RBP27.32■■□□□ 1.96
COL9A3-213ENST00000489045 SUPT16HQ9Y5B9 1047 aaKnown RBP27.32■■□□□ 1.96
COL9A3-213ENST00000489045 PLEKHM2Q8IWE5 1019 aa27.31■■□□□ 1.96
COL9A3-213ENST00000489045 PRPF38AQ8NAV1 312 aaKnown RBP27.31■■□□□ 1.96
COL9A3-213ENST00000489045 ANAPC4Q9UJX5 808 aa27.31■■□□□ 1.96
COL9A3-213ENST00000489045 PFASO15067 1338 aa27.31■■□□□ 1.96
COL9A3-213ENST00000489045 COPB2P35606 906 aa27.3■■□□□ 1.96
COL9A3-213ENST00000489045 ALX1Q15699 326 aa27.3■■□□□ 1.96
COL9A3-213ENST00000489045 ZNF589Q86UQ0 364 aaPredicted RBP27.3■■□□□ 1.96
COL9A3-213ENST00000489045 MAML3Q96JK9 1138 aa27.3■■□□□ 1.96
COL9A3-213ENST00000489045 TACC3Q9Y6A5 838 aa27.3■■□□□ 1.96
COL9A3-213ENST00000489045 TSPY2A6NKD2 308 aa27.29■■□□□ 1.96
COL9A3-213ENST00000489045 MSCO60682 206 aa27.29■■□□□ 1.96
COL9A3-213ENST00000489045 SLFN13Q68D06 897 aa27.29■■□□□ 1.96
COL9A3-213ENST00000489045 SNRNP48Q6IEG0 339 aaKnown RBP27.29■■□□□ 1.96
COL9A3-213ENST00000489045 KIFC2Q96AC6 838 aa27.29■■□□□ 1.96
COL9A3-213ENST00000489045 TEX13BQ9BXU2 312 aa27.29■■□□□ 1.96
COL9A3-213ENST00000489045 OSBPL3Q9H4L5 887 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms