RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 EIF4BP23588 611 aaKnown RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 CRB2Q5IJ48 1285 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 APBB1IPQ7Z5R6 666 aaPredicted RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 FMNL3Q8IVF7 1028 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 ABHD4Q8TB40 342 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 EVI5LQ96CN4 794 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 SRPK1Q96SB4 655 aaKnown RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 MRIQ9BWK5 157 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 FOXQ1Q9C009 403 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 CARS2Q9HA77 564 aaKnown RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 PRDM10Q9NQV6 1147 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 G3BP2Q9UN86 482 aaKnown RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 SPG7Q9UQ90 795 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 MAPK8IP1Q9UQF2 711 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 TMEM238LA0A1B0GVL6 79 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 MATN3O15232 486 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 GADD45BO75293 160 aaPredicted RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 CDC45O75419 566 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 GSTP1P09211 210 aaKnown RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 VIL1P09327 827 aaKnown RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 RHBDL3P58872 404 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 DLG4P78352 724 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 IRX6P78412 446 aaPredicted RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 HNRNPA0Q13151 305 aaKnown RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 RAB33AQ14088 237 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 RALBP1Q15311 655 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 NKPD1Q17RQ9 610 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 C4orf46Q504U0 113 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 RNF214Q8ND24 703 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 JDP2Q8WYK2 163 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 ISL2Q96A47 359 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 BCO2Q9BYV7 579 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 SRCIN1Q9C0H9 1055 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 KANSL2Q9H9L4 492 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 PRDM5Q9NQX1 630 aaPredicted RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 CNOT11Q9UKZ1 510 aaKnown RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 TTF2Q9UNY4 1162 aaKnown RBP4.58□□□□□ -1.68
PRPF4-203ENST00000488937 MSRB2Q9Y3D2 182 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 PCDHGC5Q9Y5F6 944 aa4.58□□□□□ -1.68
PRPF4-203ENST00000488937 FAM221BA6H8Z2 402 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 GIPC1O14908 333 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 PRC1O43663 620 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 ZNF862O60290 1169 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 ERVK-24P63145 666 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 PPP2R3AQ06190 1150 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 TAF1CQ15572 869 aaPredicted RBP4.57□□□□□ -1.68
PRPF4-203ENST00000488937 HSP90AB4PQ58FF6 505 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 FAM214BQ7L5A3 538 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 C3orf58Q8NDZ4 430 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 FEZF2Q8TBJ5 459 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 ANKRD24Q8TF21 1146 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 WDR89Q96FK6 387 aaPredicted RBP4.57□□□□□ -1.68
PRPF4-203ENST00000488937 DEPDC7Q96QD5 511 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 OSBPL7Q9BZF2 842 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 FANCLQ9NW38 375 aa4.57□□□□□ -1.68
PRPF4-203ENST00000488937 THRAP3Q9Y2W1 955 aaKnown RBP4.57□□□□□ -1.68
PRPF4-203ENST00000488937 ZC3H12DA2A288 527 aaKnown RBP4.56□□□□□ -1.68
PRPF4-203ENST00000488937 FAM155AB1AL88 458 aaPredicted RBP4.56□□□□□ -1.68
PRPF4-203ENST00000488937 RFXAPO00287 272 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 ETFBP38117 255 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SOX9P48436 509 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 MASP1P48740 699 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 GYS2P54840 703 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 FAAP100Q0VG06 881 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 ODR4Q5SWX8 454 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 MEI1Q5TIA1 1274 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SPTY2D1Q68D10 685 aaPredicted RBP4.56□□□□□ -1.68
PRPF4-203ENST00000488937 CCSAPQ6IQ19 270 aaPredicted RBP4.56□□□□□ -1.68
PRPF4-203ENST00000488937 NXPE4Q6UWF7 544 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 TSHZ1Q6ZSZ6 1077 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 ANKS3Q6ZW76 656 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 TEX2Q8IWB9 1127 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SH3TC2Q8TF17 1288 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SLC39A13Q96H72 371 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SGSM3Q96HU1 749 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 ALPK1Q96QP1 1244 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 PCGF6Q9BYE7 350 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SLKQ9H2G2 1235 aaPredicted RBP4.56□□□□□ -1.68
PRPF4-203ENST00000488937 COPRSQ9NQ92 184 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 TMEM260Q9NX78 707 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 STRIP2Q9ULQ0 834 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 KCTD3Q9Y597 815 aa4.56□□□□□ -1.68
PRPF4-203ENST00000488937 SEMA7AO75326 666 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 SSBP05455 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
PRPF4-203ENST00000488937 NEFMP07197 916 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 FCGRTP55899 365 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 C22orf34Q6ZV56 151 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 THAP5Q7Z6K1 395 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 LILRB2Q8N423 598 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 KCT2Q8NC54 265 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 APPBP2Q92624 585 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 BDH2Q9BUT1 245 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 ZC3H12CQ9C0D7 883 aaKnown RBP4.55□□□□□ -1.68
PRPF4-203ENST00000488937 MAF1Q9H063 256 aa4.55□□□□□ -1.68
PRPF4-203ENST00000488937 ESYT3A0FGR9 886 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 NASPP49321 788 aaPredicted RBP4.54□□□□□ -1.68
PRPF4-203ENST00000488937 BIRC2Q13490 618 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 UBE4AQ14139 1066 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms