RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	STRN	O43815	780 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	CYP2D6	P10635	497 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	ERCC3	P19447	782 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	TTF1	Q15361	905 aa	Predicted RBP	13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	SLC9C2	Q5TAH2	1124 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	ANO1	Q5XXA6	986 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	DPP9	Q86TI2	863 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	ERC1	Q8IUD2	1116 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	CLEC10A	Q8IUN9	316 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	SIAH1	Q8IUQ4	282 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	LCORL	Q8N3X6	602 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	SLC44A5	Q8NCS7	719 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	RHPN1	Q8TCX5	695 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	HOXC10	Q9NYD6	342 aa		13.76	□□□□□ -0.21
SNU13-208	ENST00000488571	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	SEPT4	O43236	478 aa		13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	DYNLL2	Q96FJ2	89 aa		13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	TANGO6	Q9C0B7	1094 aa		13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	EYS	Q5T1H1	3165 aa		13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	COL11A1	P12107	1806 aa	Predicted RBP	13.75	□□□□□ -0.21
SNU13-208	ENST00000488571	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	SMIM22	K7EJ46	135 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	GOLIM4	O00461	696 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	SNX17	Q15036	470 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	PRAMEF19	Q5SWL8	479 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	SLC39A5	Q6ZMH5	540 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	TMEM179	Q6ZVK1	233 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	MB21D1	Q8N884	522 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	ARRDC4	Q8NCT1	418 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	PANK1	Q8TE04	598 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	ATG4C	Q96DT6	458 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	FAM161B	Q96MY7	647 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	ATP11B	Q9Y2G3	1177 aa		13.74	□□□□□ -0.21
SNU13-208	ENST00000488571	PRKAB2	O43741	272 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	AKR1B1	P15121	316 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	SHH	Q15465	462 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	SLFNL1	Q499Z3	407 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	C9orf50	Q5SZB4	431 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	ABRA	Q8N0Z2	381 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	SPICE1	Q8N0Z3	855 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	MAML3	Q96JK9	1138 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	DNAJC2	Q99543	621 aa	Known RBP	13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	MROH8	Q9H579	483 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	ARMT1	Q9H993	441 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	PRKAG2	Q9UGJ0	569 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	SWAP70	Q9UH65	585 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	TMX2	Q9Y320	296 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	CDH23	Q9H251	3354 aa		13.73	□□□□□ -0.21
SNU13-208	ENST00000488571	KBTBD13	C9JR72	458 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	ST18	O60284	1047 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	FLOT1	O75955	427 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	ADCYAP1R1	P41586	468 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	ICA1	Q05084	483 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	PLS1	Q14651	629 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	LRRC41	Q15345	812 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	TRIM60	Q495X7	471 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	HSP90AB4P	Q58FF6	505 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	FAM47A	Q5JRC9	791 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	NCAPG2	Q86XI2	1143 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	VCPKMT	Q9H867	229 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	PDLIM7	Q9NR12	457 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	SMCHD1	A6NHR9	2005 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	PLXNA1	Q9UIW2	1896 aa		13.72	□□□□□ -0.21
SNU13-208	ENST00000488571	CYP2D7	A0A087X1C5	515 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	TRIM43B	A6NCK2	446 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	CHGB	P05060	677 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	TMEM132B	Q14DG7	1078 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	ZNF697	Q5TEC3	545 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	C1orf53	Q5VUE5	145 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	SH3RF1	Q7Z6J0	888 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	SIRT2	Q8IXJ6	389 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	CLASRP	Q8N2M8	674 aa	Known RBP	13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	BAD	Q92934	168 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	FERMT2	Q96AC1	680 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	KIF1BP	Q96EK5	621 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	ARHGEF10L	Q9HCE6	1279 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	SLC5A4	Q9NY91	659 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	ADAMTS5	Q9UNA0	930 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	VCAN	P13611	3396 aa		13.71	□□□□□ -0.21
SNU13-208	ENST00000488571	MYH7	P12883	1935 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	GREB1L	Q9C091	1923 aa	Predicted RBP	13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	APBB1	O00213	710 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	WDR46	O15213	610 aa	Known RBP	13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	MBD4	O95243	580 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	FCER1A	P12319	257 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	ADD2	P35612	726 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	CDK8	P49336	464 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	C12orf60	Q5U649	245 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	SH2D4A	Q9H788	454 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	ATP8A2	Q9NTI2	1148 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	FBXO28	Q9NVF7	368 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	PAG1	Q9NWQ8	432 aa		13.7	□□□□□ -0.22
SNU13-208	ENST00000488571	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.69	□□□□□ -0.22

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