RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RIOX1Q9H6W3 641 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 UTRNP46939 3433 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 GOLGA6L4A6NEF3 574 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 GDF11O95390 407 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 ICA1Q05084 483 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SLC39A14Q15043 492 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 RILPL1Q5EBL4 403 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 WWC2Q6AWC2 1192 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.673e-8■■■□□ 18.6
SF3B1-211ENST00000487698 CPVLQ9H3G5 476 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 CNOT7Q9UIV1 285 aaKnown RBP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 GJA3Q9Y6H8 435 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SYCE3A1L190 88 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SPTLC2O15270 562 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 STK38Q15208 465 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 GPATCH4Q5T3I0 446 aaKnown RBP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 PIBF1Q8WXW3 757 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 PCDHA7Q9UN72 937 aa10.87□□□□□ -0.67
SF3B1-211ENST00000487698 FRMPD2Q68DX3 1309 aaPredicted RBP10.87□□□□□ -0.67
SF3B1-211ENST00000487698 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 STXBP3O00186 592 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 GH2P01242 217 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 ME1P48163 572 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 TNNI2P48788 182 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 EARS2Q5JPH6 523 aaKnown RBP10.86□□□□□ -0.67
SF3B1-211ENST00000487698 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
SF3B1-211ENST00000487698 ADALQ6DHV7 355 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 SAMD7Q7Z3H4 446 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 RRP36Q96EU6 259 aaKnown RBP10.86□□□□□ -0.67
SF3B1-211ENST00000487698 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 BRMS1Q9HCU9 246 aa10.86□□□□□ -0.67
SF3B1-211ENST00000487698 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ADAMTS3O15072 1205 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 PPP6R2O75170 966 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 CALML3P27482 149 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 NLRP5P59047 1200 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 RASA3Q14644 834 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 KIF4BQ2VIQ3 1234 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 GPC2Q8N158 579 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 CCDC148Q8NFR7 591 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 DCAF4Q8WV16 495 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 GOLPH3LQ9H4A5 285 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 DOCK1Q14185 1865 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ASTN2O75129 1339 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 hCG_1984214I3L0E3 225 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 M0R2N6 131 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ATP2B2Q01814 1243 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 TBC1D10BQ4KMP7 808 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 GALNT17Q6IS24 598 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 HEATR3Q7Z4Q2 680 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ZNF713Q8N859 430 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 PIGSQ96S52 555 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 DACT1Q9NYF0 836 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 GPRC5DQ9NZD1 345 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 ZBTB21Q9ULJ3 1066 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 PCDHA4Q9UN74 947 aa10.85□□□□□ -0.67
SF3B1-211ENST00000487698 POLR2AP24928 1970 aaKnown RBP10.85□□□□□ -0.67
SF3B1-211ENST00000487698 NR1I2O75469 434 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 YBX3P16989 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 NOM1Q5C9Z4 860 aaKnown RBP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 ILDR2Q71H61 639 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 CCAR1Q8IX12 1150 aaKnown RBP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 BLIDQ8IZY5 108 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 MTMR8Q96EF0 704 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 JMJD4Q9H9V9 463 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 SEC63Q9UGP8 760 aaKnown RBP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 HACL1Q9UJ83 578 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 FAM160A1Q05DH4 1040 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 SNW1Q13573 536 aaKnown RBP10.84□□□□□ -0.67
SF3B1-211ENST00000487698 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
SF3B1-211ENST00000487698 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms