RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 SLC45A1Q9Y2W3 748 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 IGKV6D-41A0A0C4DH26 115 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 USP17L10C9JJH3 530 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
TOP3B-216ENST00000487485 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-216ENST00000487485 CAPN2P17655 700 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 NT5C2P49902 561 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 ICA1Q05084 483 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 CLEC10AQ8IUN9 316 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 C7orf61Q8IZ16 206 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-216ENST00000487485 CEP95Q96GE4 821 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOP3B-216ENST00000487485 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
TOP3B-216ENST00000487485 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 NMT2O60551 498 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 MCCP23508 829 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 BACE1P56817 501 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
TOP3B-216ENST00000487485 KCNB2Q92953 911 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 COA7Q96BR5 231 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 ZKSCAN3Q9BRR0 538 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 TCP11L1Q9NUJ3 509 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
TOP3B-216ENST00000487485 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 TTLL1O95922 423 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 SYN1P17600 705 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 HMGCS2P54868 508 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 TRIM32Q13049 653 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 MTMR2Q13614 643 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
TOP3B-216ENST00000487485 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 CYB5R4Q7L1T6 521 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 FEZ1Q99689 392 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 STX8Q9UNK0 236 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 SNX14Q9Y5W7 946 aa12.57□□□□□ -0.4
TOP3B-216ENST00000487485 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 MAGEA10P43363 369 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-216ENST00000487485 USP14P54578 494 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 KRT32Q14532 448 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 CCDC178Q5BJE1 867 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 MKL1Q969V6 931 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 TTC14Q96N46 770 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-216ENST00000487485 KIAA1683Q9H0B3 1180 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 TMOD4Q9NZQ9 345 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 STXBP5LQ9Y2K9 1186 aa12.56□□□□□ -0.4
TOP3B-216ENST00000487485 LAMA2P24043 3122 aaKnown RBP12.56□□□□□ -0.4
TOP3B-216ENST00000487485 NOVP48745 357 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 FAM110CQ1W6H9 321 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 MB21D2Q8IYB1 491 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-216ENST00000487485 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-216ENST00000487485 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
TOP3B-216ENST00000487485 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 RAD21O60216 631 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 HMGCRP04035 888 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 MCM5P33992 734 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 ANTXR2P58335 489 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-216ENST00000487485 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
TOP3B-216ENST00000487485 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
TOP3B-216ENST00000487485 TMEM47Q9BQJ4 181 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
TOP3B-216ENST00000487485 HMX1Q9NP08 348 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms