RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 RNF19AQ9NV58 838 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 KCNG1Q9UIX4 513 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PCOLCE2Q9UKZ9 415 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 FAN1Q9Y2M0 1017 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 CSADQ9Y600 493 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ATP10AO60312 1499 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CDC42BPAQ5VT25 1732 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 LRPPRCP42704 1394 aaKnown RBP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 LAMC1P11047 1609 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 TMEM265A0A087WTH1 108 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 U2SURPO15042 1029 aaKnown RBP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 RNGTTO60942 597 aaKnown RBP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 WDHD1O75717 1129 aaPredicted RBP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 KRT1P04264 644 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 P4HBP07237 508 aaKnown RBP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 VAMP1P23763 118 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CFPP27918 469 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 PPP2R3AQ06190 1150 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 FMR1Q06787 632 aaKnown RBP eCLIP5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CCDC184Q52MB2 194 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CLEC4GQ6UXB4 293 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 ASB16Q96NS5 453 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 MAF1Q9H063 256 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CHPF2Q9P2E5 772 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 CTNND2Q9UQB3 1225 aa5.03□□□□□ -1.6
PRPF38B-205ENST00000485810 BCORL1Q5H9F3 1711 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 WASHC2CQ9Y4E1 1318 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 BRD4O60885 1362 aaPredicted RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 KIF15Q9NS87 1388 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 LRRC10BA6NIK2 292 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 TTC36A6NLP5 189 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 ITIH2P19823 946 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 ARNTP27540 789 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 NTF4P34130 210 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 MLANAQ16655 118 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 NKPD1Q17RQ9 610 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 ZC3H12AQ5D1E8 599 aaKnown RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 RASIP1Q5U651 963 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 ANGEL2Q5VTE6 544 aaKnown RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 SDE2Q6IQ49 451 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 ZSWIM9Q86XI8 627 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 SPACA3Q8IXA5 215 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 SDR16C5Q8N3Y7 309 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 BHLHE22Q8NFJ8 381 aaPredicted RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 CXorf38Q8TB03 319 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 GPBAR1Q8TDU6 330 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 EVI5LQ96CN4 794 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 LIN37Q96GY3 246 aaPredicted RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 GPATCH3Q96I76 525 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 TOX2Q96NM4 488 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 NECAB3Q96P71 396 aaPredicted RBP5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 CACNA2D2Q9NY47 1150 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 NUDCQ9Y266 331 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 SNX11Q9Y5W9 270 aa5.02□□□□□ -1.61
PRPF38B-205ENST00000485810 NUP155O75694 1391 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 E9PCH4 1651 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 CCDC141Q6ZP82 1450 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 MAGI2Q86UL8 1455 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 PLEKHH2Q8IVE3 1493 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 ENC1O14682 589 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 XRCC5P13010 732 aaKnown RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 BMP6P22004 513 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 ERCC5P28715 1186 aaPredicted RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 CNGB1Q14028 1251 aaPredicted RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 AXDND1Q5T1B0 1012 aaPredicted RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 DNAJC14Q6Y2X3 702 aaPredicted RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 NOP58Q9Y2X3 529 aaKnown RBP5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 RPS6KL1Q9Y6S9 549 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 UNC13BO14795 1591 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 PREX2Q70Z35 1606 aa5.01□□□□□ -1.61
PRPF38B-205ENST00000485810 PRAG1Q86YV5 1406 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 DCDC2CA8MYV0 355 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 LDHBP07195 334 aaKnown RBP5□□□□□ -1.61
PRPF38B-205ENST00000485810 CELA3AP09093 270 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 TSPY4P0CV99 314 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 TSPY10P0CW01 314 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 NME2P22392 152 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 GSTT1P30711 240 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 EGFLAMQ63HQ2 1017 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 AMOTL1Q8IY63 956 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 CCDC146Q8IYE0 955 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 RNF214Q8ND24 703 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 ZSCAN18Q8TBC5 510 aaPredicted RBP5□□□□□ -1.61
PRPF38B-205ENST00000485810 ACSBG1Q96GR2 724 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 TANGO6Q9C0B7 1094 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 LNPKQ9C0E8 428 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 C19orf73Q9NVV2 129 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 FAM53CQ9NYF3 392 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 MYBBP1AQ9BQG0 1328 aaKnown RBP5□□□□□ -1.61
PRPF38B-205ENST00000485810 PARD3Q8TEW0 1356 aa5□□□□□ -1.61
PRPF38B-205ENST00000485810 FAM135AQ9P2D6 1515 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PLXNC1O60486 1568 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 SAMD9LQ8IVG5 1584 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 SHROOM2Q13796 1616 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 IGF2BP3O00425 579 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 USP17L7P0C7H9 530 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 COPB2P35606 906 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ERVK-24P63145 666 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ATP2B2Q01814 1243 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms