RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 OTUD7AQ8TE49 926 aaPredicted RBP30.73■■■□□ 2.51
HLA-F-227ENST00000485513 FBXO28Q9NVF7 368 aa30.73■■■□□ 2.51
HLA-F-227ENST00000485513 DDX20Q9UHI6 824 aaKnown RBP30.73■■■□□ 2.51
HLA-F-227ENST00000485513 ZMYND8Q9ULU4 1186 aaPredicted RBP30.73■■■□□ 2.51
HLA-F-227ENST00000485513 COL11A1P12107 1806 aaPredicted RBP30.73■■■□□ 2.51
HLA-F-227ENST00000485513 MSCO60682 206 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 IGHA2P01877 340 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 TMEM132BQ14DG7 1078 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 ABRAQ8N0Z2 381 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 SLC5A4Q9NY91 659 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 ADAMTS5Q9UNA0 930 aa30.72■■■□□ 2.51
HLA-F-227ENST00000485513 A0A1W2PPC1 479 aa30.71■■■□□ 2.51
HLA-F-227ENST00000485513 COBLO75128 1261 aa30.71■■■□□ 2.51
HLA-F-227ENST00000485513 SLC25A27O95847 323 aa30.71■■■□□ 2.51
HLA-F-227ENST00000485513 FAM83BQ5T0W9 1011 aa30.71■■■□□ 2.51
HLA-F-227ENST00000485513 TRPV1Q8NER1 839 aa30.71■■■□□ 2.51
HLA-F-227ENST00000485513 PATL2C9JE40 543 aaKnown RBP30.7■■■□□ 2.51
HLA-F-227ENST00000485513 CYBAP13498 195 aa30.7■■■□□ 2.51
HLA-F-227ENST00000485513 FSD1Q9BTV5 496 aa30.7■■■□□ 2.51
HLA-F-227ENST00000485513 NYAP2Q9P242 653 aa30.7■■■□□ 2.51
HLA-F-227ENST00000485513 PPP1R9AQ9ULJ8 1098 aa30.7■■■□□ 2.51
HLA-F-227ENST00000485513 FCER1AP12319 257 aa30.69■■■□□ 2.5
HLA-F-227ENST00000485513 MX1P20591 662 aa30.69■■■□□ 2.5
HLA-F-227ENST00000485513 ZNF287Q9HBT7 754 aa30.69■■■□□ 2.5
HLA-F-227ENST00000485513 ZNFX1Q9P2E3 1918 aaKnown RBP30.69■■■□□ 2.5
HLA-F-227ENST00000485513 VWA5AO00534 786 aa30.68■■■□□ 2.5
HLA-F-227ENST00000485513 IFNL3Q8IZI9 196 aa30.68■■■□□ 2.5
HLA-F-227ENST00000485513 SEC62Q99442 399 aaKnown RBP30.68■■■□□ 2.5
HLA-F-227ENST00000485513 SYN1P17600 705 aa30.67■■■□□ 2.5
HLA-F-227ENST00000485513 RIOX2Q8IUF8 465 aa30.67■■■□□ 2.5
HLA-F-227ENST00000485513 ZNF444Q8N0Y2 327 aaPredicted RBP30.67■■■□□ 2.5
HLA-F-227ENST00000485513 GDF15Q99988 308 aa30.67■■■□□ 2.5
HLA-F-227ENST00000485513 NACAP1Q9BZK3 213 aa30.67■■■□□ 2.5
HLA-F-227ENST00000485513 ZBTB47Q9UFB7 747 aaPredicted RBP30.67■■■□□ 2.5
HLA-F-227ENST00000485513 PRDM1O75626 825 aa30.66■■■□□ 2.5
HLA-F-227ENST00000485513 LRRC26Q2I0M4 334 aa30.66■■■□□ 2.5
HLA-F-227ENST00000485513 CRBNQ96SW2 442 aa30.66■■■□□ 2.5
HLA-F-227ENST00000485513 NUP88Q99567 741 aaPredicted RBP30.66■■■□□ 2.5
HLA-F-227ENST00000485513 MYH4Q9Y623 1939 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 IGKV6D-41A0A0C4DH26 115 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 F5H6K3 240 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 BMP8BP34820 402 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 STAT3P40763 770 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 KLRC3Q07444 240 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 ZMYM1Q5SVZ6 1142 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 MAML3Q96JK9 1138 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 MMP19Q99542 508 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 CLIP2Q9UDT6 1046 aa30.65■■■□□ 2.5
HLA-F-227ENST00000485513 ZNF214Q9UL59 606 aaPredicted RBP30.65■■■□□ 2.5
HLA-F-227ENST00000485513 NDUFB10O96000 172 aa30.64■■■□□ 2.5
HLA-F-227ENST00000485513 REPS2Q8NFH8 660 aa30.64■■■□□ 2.5
HLA-F-227ENST00000485513 SLF1Q9BQI6 1058 aa30.64■■■□□ 2.5
HLA-F-227ENST00000485513 SENP6Q9GZR1 1112 aaPredicted RBP30.64■■■□□ 2.5
HLA-F-227ENST00000485513 SZT2Q5T011 3432 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 DNM1LO00429 736 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 COPB2P35606 906 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 ANKRD45Q5TZF3 282 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 NAPBQ9H115 298 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 SALL3Q9BXA9 1300 aa30.63■■■□□ 2.49
HLA-F-227ENST00000485513 SEPT4O43236 478 aa30.62■■■□□ 2.49
HLA-F-227ENST00000485513 MAGEA10P43363 369 aaPredicted RBP30.62■■■□□ 2.49
HLA-F-227ENST00000485513 KCTD2Q14681 263 aa30.62■■■□□ 2.49
HLA-F-227ENST00000485513 CEP95Q96GE4 821 aa30.62■■■□□ 2.49
HLA-F-227ENST00000485513 PDE4BQ07343 736 aa30.61■■■□□ 2.49
HLA-F-227ENST00000485513 PRAMEF19Q5SWL8 479 aa30.61■■■□□ 2.49
HLA-F-227ENST00000485513 ARRDC4Q8NCT1 418 aa30.61■■■□□ 2.49
HLA-F-227ENST00000485513 MKL1Q969V6 931 aa30.61■■■□□ 2.49
HLA-F-227ENST00000485513 MTMR4Q9NYA4 1195 aa30.61■■■□□ 2.49
HLA-F-227ENST00000485513 PGK2P07205 417 aa30.6■■■□□ 2.49
HLA-F-227ENST00000485513 SLC3A2P08195 630 aaKnown RBP30.6■■■□□ 2.49
HLA-F-227ENST00000485513 ANO1Q5XXA6 986 aa30.6■■■□□ 2.49
HLA-F-227ENST00000485513 PRPF38AQ8NAV1 312 aaKnown RBP30.6■■■□□ 2.49
HLA-F-227ENST00000485513 PLXNA1Q9UIW2 1896 aa30.6■■■□□ 2.49
HLA-F-227ENST00000485513 DNAH12Q6ZR08 3092 aa30.6■■■□□ 2.49
HLA-F-227ENST00000485513 TTLL1O95922 423 aa30.59■■■□□ 2.49
HLA-F-227ENST00000485513 PPARAQ07869 468 aa30.59■■■□□ 2.49
HLA-F-227ENST00000485513 GJC2Q5T442 439 aaPredicted RBP30.59■■■□□ 2.49
HLA-F-227ENST00000485513 TEX13BQ9BXU2 312 aa30.59■■■□□ 2.49
HLA-F-227ENST00000485513 SYNPO2Q9UMS6 1093 aa30.59■■■□□ 2.49
HLA-F-227ENST00000485513 PLIN4Q96Q06 1357 aa30.58■■■□□ 2.49
HLA-F-227ENST00000485513 TSPY3P0CV98 308 aa30.58■■■□□ 2.49
HLA-F-227ENST00000485513 TSPY8P0CW00 308 aa30.58■■■□□ 2.49
HLA-F-227ENST00000485513 HDAC1Q13547 482 aaPredicted RBP30.58■■■□□ 2.49
HLA-F-227ENST00000485513 NEDD1Q8NHV4 660 aa30.58■■■□□ 2.49
HLA-F-227ENST00000485513 DIS3Q9Y2L1 958 aaKnown RBP30.58■■■□□ 2.49
HLA-F-227ENST00000485513 KBTBD13C9JR72 458 aa30.57■■■□□ 2.48
HLA-F-227ENST00000485513 ATN1P54259 1190 aaPredicted RBP30.57■■■□□ 2.48
HLA-F-227ENST00000485513 ZNF792Q3KQV3 632 aa30.57■■■□□ 2.48
HLA-F-227ENST00000485513 SNRNP48Q6IEG0 339 aaKnown RBP30.57■■■□□ 2.48
HLA-F-227ENST00000485513 LRRC47Q8N1G4 583 aaKnown RBP30.57■■■□□ 2.48
HLA-F-227ENST00000485513 NRBP1Q9UHY1 535 aa30.57■■■□□ 2.48
HLA-F-227ENST00000485513 SOX1O00570 391 aaPredicted RBP30.56■■■□□ 2.48
HLA-F-227ENST00000485513 TFAP4Q01664 338 aa30.56■■■□□ 2.48
HLA-F-227ENST00000485513 FAM47AQ5JRC9 791 aa30.56■■■□□ 2.48
HLA-F-227ENST00000485513 CCDC129Q6ZRS4 1044 aa30.56■■■□□ 2.48
HLA-F-227ENST00000485513 GMCL1P1Q8NEA9 526 aa30.56■■■□□ 2.48
HLA-F-227ENST00000485513 TINF2Q9BSI4 451 aa30.56■■■□□ 2.48
HLA-F-227ENST00000485513 CTDP1Q9Y5B0 961 aaPredicted RBP30.56■■■□□ 2.48
HLA-F-227ENST00000485513 ZBED4O75132 1171 aa30.55■■■□□ 2.48
HLA-F-227ENST00000485513 KIFC2Q96AC6 838 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms