RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 BAZ2AQ9UIF9 1905 aaKnown RBP15.68■□□□□ 0.1
HDAC6-227ENST00000485102 USP17L12C9JPN9 530 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 USP17L21D6R901 530 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 PRKAB2O43741 272 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 COPB2P35606 906 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 ADCYAP1R1P41586 468 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 PLS1Q14651 629 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 SHHQ15465 462 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 PRAMEF19Q5SWL8 479 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 SPICE1Q8N0Z3 855 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 HAUS7Q99871 368 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 PDLIM7Q9NR12 457 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 DDX19BQ9UMR2 479 aa15.68■□□□□ 0.1
HDAC6-227ENST00000485102 VCANP13611 3396 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 MBD4O95243 580 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
HDAC6-227ENST00000485102 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
HDAC6-227ENST00000485102 ZNF792Q3KQV3 632 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 TRIM60Q495X7 471 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 FAM47AQ5JRC9 791 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 ZNF697Q5TEC3 545 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 ANO1Q5XXA6 986 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
HDAC6-227ENST00000485102 DDRGK1Q96HY6 314 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 TINF2Q9BSI4 451 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 ZNF214Q9UL59 606 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-227ENST00000485102 PPP1R9AQ9ULJ8 1098 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 TACC3Q9Y6A5 838 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 CDH23Q9H251 3354 aa15.67■□□□□ 0.1
HDAC6-227ENST00000485102 VWA5AO00534 786 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 RARBP10826 455 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 STAT3P40763 770 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 KCTD2Q14681 263 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 RNF180Q86T96 592 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.66■□□□□ 0.1
HDAC6-227ENST00000485102 REPS2Q8NFH8 660 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 BADQ92934 168 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 MMP19Q99542 508 aa15.66■□□□□ 0.1
HDAC6-227ENST00000485102 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
HDAC6-227ENST00000485102 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-227ENST00000485102 TRIM43BA6NCK2 446 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 SMIM22K7EJ46 135 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 ZNF865P0CJ78 1059 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-227ENST00000485102 TLE2Q04725 743 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 SLFNL1Q499Z3 407 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 C9orf50Q5SZB4 431 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 ZSCAN25Q6NSZ9 544 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 CTR9Q6PD62 1173 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 TRIM43Q96BQ3 446 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-227ENST00000485102 TSEN34Q9BSV6 310 aaKnown RBP15.65■□□□□ 0.1
HDAC6-227ENST00000485102 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.65■□□□□ 0.1
HDAC6-227ENST00000485102 COL25A1Q9BXS0 654 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-227ENST00000485102 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 GOPCQ9HD26 462 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 XPNPEP3Q9NQH7 507 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
HDAC6-227ENST00000485102 MYH7P12883 1935 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 APBB1O00213 710 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 KIAA0355O15063 1070 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 SBK1Q52WX2 424 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 GIMAP6Q6P9H5 292 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 SH3RF1Q7Z6J0 888 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 FERMT2Q96AC1 680 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 CDX2Q99626 313 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-227ENST00000485102 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-227ENST00000485102 ARPP21Q9UBL0 812 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-227ENST00000485102 PLXNA1Q9UIW2 1896 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 SLC4A4Q9Y6R1 1079 aa15.64■□□□□ 0.09
HDAC6-227ENST00000485102 TTC28Q96AY4 2481 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 GREB1LQ9C091 1923 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-227ENST00000485102 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 ADAMTS4O75173 837 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 PGK2P07205 417 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 AKR1A1P14550 325 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDAC6-227ENST00000485102 ANKRD33Q7Z3H0 272 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 PUS7LQ9H0K6 701 aaKnown RBP15.63■□□□□ 0.09
HDAC6-227ENST00000485102 NYAP2Q9P242 653 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 SYNGAP1Q96PV0 1343 aa15.63■□□□□ 0.09
HDAC6-227ENST00000485102 DNAJC25-GNG10A0A024R161 153 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 CLTBP09497 229 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 TAL1P17542 331 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-227ENST00000485102 ZNF467Q7Z7K2 595 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-227ENST00000485102 KLHDC9Q8NEP7 349 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 FAM161BQ96MY7 647 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
HDAC6-227ENST00000485102 TEX13BQ9BXU2 312 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 SYNPO2Q9UMS6 1093 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 CNPY2Q9Y2B0 182 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 EYSQ5T1H1 3165 aa15.62■□□□□ 0.09
HDAC6-227ENST00000485102 A0A1W2PQ45 241 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-227ENST00000485102 A0A1W2PQY0 241 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms