RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
RPGR-208ENST00000482855 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
RPGR-208ENST00000482855 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 MEFVO15553 781 aaPredicted RBP12.39□□□□□ -0.43
RPGR-208ENST00000482855 TDO2P48775 406 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 SKOR1P84550 965 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 MICALCLQ6ZW33 695 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 KRT86O43790 486 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 CASP1P29466 404 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 CASP7P55210 303 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 NEDD9Q14511 834 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 TMEM87BQ96K49 555 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 KCNJ14Q9UNX9 436 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 MYH7P12883 1935 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 EYA2O00167 538 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 CHUKO15111 745 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 FMNL1O95466 1100 aaPredicted RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 KRT83P78385 493 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 FOXO4P98177 505 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 PDCLQ13371 301 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 LRRC24Q50LG9 513 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 RRP36Q96EU6 259 aaKnown RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 XAGE2Q96GT9 111 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 LRRC10BA6NIK2 292 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 C21orf2O43822 256 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 EPB41P11171 864 aaKnown RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 HERVK_113P62684 666 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 OR8K1Q8NGG5 319 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
RPGR-208ENST00000482855 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
RPGR-208ENST00000482855 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 B4E1Z4 1266 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
RPGR-208ENST00000482855 ZNF185O15231 689 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 COBLO75128 1261 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 UBXN1Q04323 297 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 DPYDQ12882 1025 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 SH3RF1Q7Z6J0 888 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 AATFQ9NY61 560 aaKnown RBP eCLIP12.37□□□□□ -0.43
RPGR-208ENST00000482855 TFR2Q9UP52 801 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 HSF2BPO75031 334 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 GCP02774 474 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 IDEP14735 1019 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 ALS2CLQ60I27 953 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 TRIM22Q8IYM9 498 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 RUBCNQ92622 972 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 ZKSCAN4Q969J2 545 aaPredicted RBP12.37□□□□□ -0.43
RPGR-208ENST00000482855 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 CD248Q9HCU0 757 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
RPGR-208ENST00000482855 SLC12A7Q9Y666 1083 aa12.37□□□□□ -0.43
RPGR-208ENST00000482855 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 A0A087X0B3 334 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
RPGR-208ENST00000482855 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
RPGR-208ENST00000482855 NR5A1Q13285 461 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 TTMPQ5BVD1 217 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 RRAGBQ5VZM2 374 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 EPSTI1Q96J88 318 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
RPGR-208ENST00000482855 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 TTC26A0AVF1 554 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 ZEB2O60315 1214 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
RPGR-208ENST00000482855 IFNAR1P17181 557 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 ELF1P32519 619 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 EPHB4P54760 987 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 ZNF662Q6ZS27 426 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
RPGR-208ENST00000482855 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
RPGR-208ENST00000482855 IGDCC4Q8TDY8 1250 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms