RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 MOV10L1Q9BXT6 1211 aaKnown RBP19.63■□□□□ 0.73
VAMP4-204ENST00000482519 SPATC1LQ9H0A9 340 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.63■□□□□ 0.73
VAMP4-204ENST00000482519 TACC3Q9Y6A5 838 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 BRCA2P51587 3418 aa19.63■□□□□ 0.73
VAMP4-204ENST00000482519 NMT2O60551 498 aa19.62■□□□□ 0.73
VAMP4-204ENST00000482519 HMGCRP04035 888 aa19.62■□□□□ 0.73
VAMP4-204ENST00000482519 GSPT1P15170 499 aaKnown RBP19.62■□□□□ 0.73
VAMP4-204ENST00000482519 RGS2P41220 211 aa19.62■□□□□ 0.73
VAMP4-204ENST00000482519 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
VAMP4-204ENST00000482519 PLIN4Q96Q06 1357 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 TRIM32Q13049 653 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 MORN1Q5T089 497 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 NCAPG2Q86XI2 1143 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 TRIB2Q92519 343 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 MKL1Q969V6 931 aa19.61■□□□□ 0.73
VAMP4-204ENST00000482519 SLC15A5A6NIM6 579 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 GJB1P08034 283 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 ZKSCAN1P17029 563 aaPredicted RBP19.6■□□□□ 0.73
VAMP4-204ENST00000482519 ERCC3P19447 782 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 PTPREP23469 700 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 MAP2K5Q13163 448 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 CCL14Q16627 93 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 SLFN13Q68D06 897 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 NKX2-3Q8TAU0 364 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 DEFB118Q96PH6 123 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 IL17RBQ9NRM6 502 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 PPP1R9AQ9ULJ8 1098 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
VAMP4-204ENST00000482519 ZMYM6O95789 1325 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 VWA5AO00534 786 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 ZNF213O14771 459 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 ORC4O43929 436 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 XRCC5P13010 732 aaKnown RBP19.59■□□□□ 0.73
VAMP4-204ENST00000482519 TMEM132BQ14DG7 1078 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 PPP4R3BQ5MIZ7 849 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 MFSD6Q6ZSS7 791 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 GMCL1P1Q8NEA9 526 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 USP6NLQ92738 828 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 APBA2Q99767 749 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 COL11A1P12107 1806 aaPredicted RBP19.59■□□□□ 0.73
VAMP4-204ENST00000482519 A0A0G2JMZ2 1700 aa19.59■□□□□ 0.73
VAMP4-204ENST00000482519 TFRCP02786 760 aaKnown RBP19.58■□□□□ 0.72
VAMP4-204ENST00000482519 FGRP09769 529 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 GJA8P48165 433 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 SLC4A3P48751 1232 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 AKNAD1Q5T1N1 836 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 TRMT44Q8IYL2 757 aaKnown RBP19.58■□□□□ 0.72
VAMP4-204ENST00000482519 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
VAMP4-204ENST00000482519 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 MROH8Q9H579 483 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 SYNPO2Q9UMS6 1093 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 ADAMTS5Q9UNA0 930 aa19.58■□□□□ 0.72
VAMP4-204ENST00000482519 CTDP1Q9Y5B0 961 aaPredicted RBP19.58■□□□□ 0.72
VAMP4-204ENST00000482519 PDE4DIPQ5VU43 2346 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 BMP3P12645 472 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 PRKAR2AP13861 404 aaKnown RBP19.57■□□□□ 0.72
VAMP4-204ENST00000482519 MCCP23508 829 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 STAT3P40763 770 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 GRB14Q14449 540 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 DPP9Q86TI2 863 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
VAMP4-204ENST00000482519 SHCBP1Q8NEM2 672 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 SHISA4Q96DD7 197 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
VAMP4-204ENST00000482519 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.57■□□□□ 0.72
VAMP4-204ENST00000482519 RNF41Q9H4P4 317 aaPredicted RBP19.57■□□□□ 0.72
VAMP4-204ENST00000482519 HMX1Q9NP08 348 aaPredicted RBP19.57■□□□□ 0.72
VAMP4-204ENST00000482519 STRNO43815 780 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 SGPL1O95470 568 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 ADORA2AP29274 412 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 SLC1A4P43007 532 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 IKQ13123 557 aaPredicted RBP19.56■□□□□ 0.72
VAMP4-204ENST00000482519 DSCC1Q9BVC3 393 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 IL25Q9H293 177 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 FEM1BQ9UK73 627 aa19.56■□□□□ 0.72
VAMP4-204ENST00000482519 RPTORQ8N122 1335 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 TMEM232C9JQI7 657 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 ZBED4O75132 1171 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 SLC25A27O95847 323 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 CHMLP26374 656 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 IMMTQ16891 758 aaKnown RBP19.55■□□□□ 0.72
VAMP4-204ENST00000482519 CPXCR1Q8N123 301 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 STAG1Q8WVM7 1258 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 RUFY2Q8WXA3 655 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 PAK6Q9NQU5 681 aaPredicted RBP19.55■□□□□ 0.72
VAMP4-204ENST00000482519 CTNNA3Q9UI47 895 aa19.55■□□□□ 0.72
VAMP4-204ENST00000482519 NEDD4P46934 1319 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 FCER1AP12319 257 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 CACNB2Q08289 660 aaPredicted RBP19.54■□□□□ 0.72
VAMP4-204ENST00000482519 MFSD14CQ5VZR4 134 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 SNRNP48Q6IEG0 339 aaKnown RBP19.54■□□□□ 0.72
VAMP4-204ENST00000482519 KCTD1Q719H9 257 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 CENPQQ7L2Z9 268 aaPredicted RBP19.54■□□□□ 0.72
VAMP4-204ENST00000482519 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 NPLOC4Q8TAT6 608 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 ESR2Q92731 530 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms