RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 SOCS4Q8WXH5 440 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-208ENST00000479381 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 MTMR7Q9Y216 660 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 TSPY2A6NKD2 308 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 WDR46O15213 610 aaKnown RBP10.79□□□□□ -0.68
CMTM1-208ENST00000479381 IGHDP01880 384 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 TFRCP02786 760 aaKnown RBP10.79□□□□□ -0.68
CMTM1-208ENST00000479381 RGS2P41220 211 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 MFAP1P55081 439 aaKnown RBP10.79□□□□□ -0.68
CMTM1-208ENST00000479381 PPARAQ07869 468 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 COG2Q14746 738 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 PLEKHH3Q7Z736 793 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 LPAR1Q92633 364 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 EPB41L4AQ9HCS5 686 aaPredicted RBP10.79□□□□□ -0.68
CMTM1-208ENST00000479381 TXNRD2Q9NNW7 524 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
CMTM1-208ENST00000479381 A0A1W2PRG0 241 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-208ENST00000479381 RANBP6O60518 1105 aaKnown RBP10.78□□□□□ -0.68
CMTM1-208ENST00000479381 HMGCRP04035 888 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-208ENST00000479381 IRF5Q13568 498 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 FAM47AQ5JRC9 791 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 SMC5Q8IY18 1101 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 LRRC47Q8N1G4 583 aaKnown RBP10.78□□□□□ -0.68
CMTM1-208ENST00000479381 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 RBPJLQ9UBG7 517 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
CMTM1-208ENST00000479381 HIP1O00291 1037 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 RASA1P20936 1047 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 TFAP4Q01664 338 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 NUCB1Q02818 461 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 Q3C1V9 767 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 CWC27Q6UX04 472 aaKnown RBP10.77□□□□□ -0.69
CMTM1-208ENST00000479381 DPP9Q86TI2 863 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 DPF3Q92784 378 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 ATG4CQ96DT6 458 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 DEFB118Q96PH6 123 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 PORCNQ9H237 461 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
CMTM1-208ENST00000479381 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
CMTM1-208ENST00000479381 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.69
CMTM1-208ENST00000479381 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
CMTM1-208ENST00000479381 A0A0D9SFI3 127 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 TTLL1O95922 423 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 CNGA1P29973 690 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 HAND2P61296 217 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 MFSD14CQ5VZR4 134 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
CMTM1-208ENST00000479381 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
CMTM1-208ENST00000479381 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 APBA2Q99767 749 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.76□□□□□ -0.69
CMTM1-208ENST00000479381 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 CCDC171Q6TFL3 1326 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 SALL3Q9BXA9 1300 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
CMTM1-208ENST00000479381 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-208ENST00000479381 GJB1P08034 283 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 SDSP20132 328 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 NUP88Q99567 741 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-208ENST00000479381 HTATIP2Q9BUP3 242 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 SPATC1LQ9H0A9 340 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 BTBD7Q9P203 1132 aa10.75□□□□□ -0.69
CMTM1-208ENST00000479381 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 F5H6K3 240 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 ZBED4O75132 1171 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 NDUFB10O96000 172 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 ERCC3P19447 782 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 PTPREP23469 700 aa10.74□□□□□ -0.69
CMTM1-208ENST00000479381 GJA8P48165 433 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms