RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 TPM3P06753 285 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 USP17L8P0C7I0 530 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 NAT1P18440 290 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 FLT3P36888 993 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 IFIT1BQ5T764 474 aaKnown RBP6.88□□□□□ -1.31
SH3D19-207ENST00000478503 LCA5Q86VQ0 697 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 SLC44A5Q8NCS7 719 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 VPS37AQ8NEZ2 397 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 SETDB2Q96T68 719 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 KRT23Q9C075 422 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 SWAP70Q9UH65 585 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 MAPK8IP1Q9UQF2 711 aa6.88□□□□□ -1.31
SH3D19-207ENST00000478503 A0A1W2PQ27 194 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 A0A1W2PQ64 194 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 A0A1W2PQD8 194 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 POM121CA8CG34 1229 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ZPR1O75312 459 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 POU5F1Q01860 360 aaKnown RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ZKSCAN8Q15776 578 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 GRIK5Q16478 980 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 SDE2Q6IQ49 451 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 CRACR2BQ8N4Y2 399 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 UIMC1Q96RL1 719 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 MAP3K14Q99558 947 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 MCM9Q9NXL9 1143 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 LAMA4Q16363 1823 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 BMP6P22004 513 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 U2AF2P26368 475 aaKnown RBP eCLIP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 RPS8P62241 208 aaKnown RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 FANCCQ00597 558 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 GRM1Q13255 1194 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 C4orf46Q504U0 113 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 PARP10Q53GL7 1025 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 CSRNP2Q9H175 543 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ABCC12Q96J65 1359 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 COL4A1P02462 1669 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 XIRP1Q702N8 1843 aaKnown RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 CAPN15O75808 1086 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 MMP1P03956 469 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 GOLGA8HP0CJ92 632 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 UBASH3AP57075 661 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 NLRP12P59046 1061 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 NFIXQ14938 502 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 SLMAPQ14BN4 828 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ODR4Q5SWX8 454 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 CEP135Q66GS9 1140 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ARMCX5Q6P1M9 558 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 SUGP1Q8IWZ8 645 aaKnown RBP6.87□□□□□ -1.31
SH3D19-207ENST00000478503 ESR2Q92731 530 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 BLZF1Q9H2G9 400 aa6.87□□□□□ -1.31
SH3D19-207ENST00000478503 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 VWA3AA6NCI4 1184 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 IFNAR1P17181 557 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 NCAPHQ15003 741 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 RNF187Q5TA31 235 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 SGMS1Q86VZ5 419 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 TRIML1Q8N9V2 468 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 GLMNQ92990 594 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 CNNM2Q9H8M5 875 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 TAF1P21675 1872 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 SFPQP23246 707 aaKnown RBP eCLIP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 LIFRP42702 1097 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 CCZ1BP86790 482 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 CCZ1P86791 482 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 FMR1Q06787 632 aaKnown RBP eCLIP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 INF2Q27J81 1249 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 CTR9Q6PD62 1173 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 MAMSTRQ6ZN01 415 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 JMYQ8N9B5 988 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 CCDC112Q8NEF3 446 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 ZNF512BQ96KM6 892 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 ZSCAN10Q96SZ4 725 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 RIOK1Q9BRS2 568 aaKnown RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 VAT1LQ9HCJ6 419 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 NUP188Q5SRE5 1749 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 PARP4Q9UKK3 1724 aaKnown RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 LDHCP07864 332 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 HIBADHP31937 336 aaKnown RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 MCM7P33993 719 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 ADKP55263 362 aaKnown RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 TCEAL1Q15170 157 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 LONRF1Q17RB8 773 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 ATL3Q6DD88 541 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 PIK3AP1Q6ZUJ8 805 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
SH3D19-207ENST00000478503 DZIP1Q86YF9 867 aaKnown RBP6.86□□□□□ -1.31
SH3D19-207ENST00000478503 STAG1Q8WVM7 1258 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms