RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SPC24Q8NBT2 197 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PICALMQ13492 652 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MLKLQ8NB16 471 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SMARCE1Q969G3 411 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ZMYND12Q9H0C1 365 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 C6orf50Q9HD87 102 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 IMPACTQ9P2X3 320 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
TRAF3IP3-213ENST00000478359 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TTLL1O95922 423 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SLFN14P0C7P3 912 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 LONP1P36776 959 aaKnown RBP14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TXLNAP40222 546 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CRKP46108 304 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MYL5Q02045 173 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PTGDRQ13258 359 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PNOCQ13519 176 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 EARS2Q5JPH6 523 aaKnown RBP14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MSL1Q68DK7 614 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CDC42EP5Q6NZY7 148 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TTC12Q9H892 705 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SERPINA10Q9UK55 444 aa14.21□□□□□ -0.13
TRAF3IP3-213ENST00000478359 IGKV6D-41A0A0C4DH26 115 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ESYT2A0FGR8 921 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 M0R2N6 131 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 STXBP3O00186 592 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 CYTH3O43739 400 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SARSP49591 514 aaKnown RBP14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SOGA3Q5TF21 947 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 WWC2Q6AWC2 1192 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 APOBEC3HQ6NTF7 200 aaKnown RBP14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 KRT25Q7Z3Z0 450 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 HEATR3Q7Z4Q2 680 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 CAMKK2Q96RR4 588 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 IDI2Q9BXS1 227 aa14.21□□□□□ -0.14
TRAF3IP3-213ENST00000478359 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 BIN1O00499 593 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 CBFA2T2O43439 604 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ACTN4O43707 911 aaKnown RBP14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ECE2O60344 883 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GSDMDP57764 484 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NOLC1Q14978 699 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ZNF174Q15697 407 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 CCDC186Q7Z3E2 898 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 IQUBQ8NA54 791 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 RIOX1Q9H6W3 641 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SERTAD1Q9UHV2 236 aa14.2□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PRPHP41219 470 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GRIN1Q05586 938 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SPECC1Q5M775 1068 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 DACT2Q5SW24 774 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GPATCH4Q5T3I0 446 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 KIAA1524Q8TCG1 905 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GPKOWQ92917 476 aaPredicted RBP eCLIP14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GSDMAQ96QA5 445 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 DBNDD1Q9H9R9 158 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SPTLC3Q9NUV7 552 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
TRAF3IP3-213ENST00000478359 VWA3AA6NCI4 1184 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PDHBP11177 359 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SCNN1DP51172 638 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NAPAP54920 295 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SEMA3FQ13275 785 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PPP1R18Q6NYC8 613 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PCDHA6Q9UN73 950 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PCDHA8Q9Y5H6 950 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 GREB1LQ9C091 1923 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NRDCO43847 1150 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ERCC5P28715 1186 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 MCM7P33993 719 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 MORC3Q14149 939 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NCAPHQ15003 741 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 C7orf43Q8WVR3 580 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PI4KBQ9UBF8 816 aa14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 COL2A1P02458 1487 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ZNF646O15015 1829 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PTGS1P23219 599 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SHMT1P34896 483 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NONOQ15233 471 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 USP17L2Q6R6M4 530 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 DTHD1Q6ZMT9 781 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 SH3RF1Q7Z6J0 888 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 FOXP4Q8IVH2 680 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 PDILTQ8N807 584 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 ZNF830Q96NB3 372 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 NAP1L5Q96NT1 182 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
TRAF3IP3-213ENST00000478359 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms