RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
PRPF39-203ENST00000477626 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 CCDC17Q96LX7 622 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 GZF1Q9H116 711 aaPredicted RBP14.02□□□□□ -0.17
PRPF39-203ENST00000477626 GRPEL1Q9HAV7 217 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 MYOZ2Q9NPC6 264 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.17
PRPF39-203ENST00000477626 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 PCDHA6Q9UN73 950 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 PCDHB6Q9Y5E3 794 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 PCDHA8Q9Y5H6 950 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 SYCE3A1L190 88 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 CSPP1Q1MSJ5 1256 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 NBPF9Q3BBW0 867 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
PRPF39-203ENST00000477626 ASTN2O75129 1339 aaPredicted RBP14.01□□□□□ -0.17
PRPF39-203ENST00000477626 PTPREP23469 700 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 CMA1P23946 247 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 SF3A1Q15459 793 aaKnown RBP14.01□□□□□ -0.17
PRPF39-203ENST00000477626 USP17L2Q6R6M4 530 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 KCNG4Q8TDN1 519 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 PANK2Q9BZ23 570 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
PRPF39-203ENST00000477626 OPLAHO14841 1288 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 SPATA20Q8TB22 786 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
PRPF39-203ENST00000477626 P2RX7Q99572 595 aaKnown RBP14□□□□□ -0.17
PRPF39-203ENST00000477626 SPON1Q9HCB6 807 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 ZNF112Q9UJU3 913 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 FOSBP53539 338 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 PPP1R9BQ96SB3 815 aa14□□□□□ -0.17
PRPF39-203ENST00000477626 FAM196BA6NMK8 535 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 NDUFA8P51970 172 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-203ENST00000477626 PCDHA4Q9UN74 947 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 AP5Z1O43299 807 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 KIF5BP33176 963 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 TOMM22Q9NS69 142 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 A0A087X0B3 334 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 MRE11P49959 708 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-203ENST00000477626 NT5DC1Q5TFE4 455 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 TRIM22Q8IYM9 498 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
PRPF39-203ENST00000477626 PPP1R1BQ9UD71 204 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-203ENST00000477626 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 SPTLC2O15270 562 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 PLA2G6O60733 806 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 FAM160A1Q05DH4 1040 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 CIAPIN1Q6FI81 312 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 TMEM179Q6ZVK1 233 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 DACT1Q9NYF0 836 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 EEF2P13639 858 aaKnown RBP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 RILPL1Q5EBL4 403 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 AMOTL1Q8IY63 956 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 CTCFLQ8NI51 663 aaPredicted RBP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 hCG_1984214I3L0E3 225 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 YBX3P16989 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 KRT2P35908 639 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 GNAQP50148 359 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 GALNT17Q6IS24 598 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 ZNF713Q8N859 430 aaPredicted RBP13.98□□□□□ -0.17
PRPF39-203ENST00000477626 LRRC15Q8TF66 581 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 TMEM39BQ9GZU3 492 aa13.98□□□□□ -0.17
PRPF39-203ENST00000477626 HIRAP54198 1017 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-203ENST00000477626 TCP10Q12799 353 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 E2F4Q16254 413 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 DEFB129Q9H1M3 183 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 DDX19AQ9NUU7 478 aaKnown RBP13.97□□□□□ -0.17
PRPF39-203ENST00000477626 GHRHRQ02643 423 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 PPP1R18Q6NYC8 613 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.173e-6■■■■□ 23.6
PRPF39-203ENST00000477626 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-203ENST00000477626 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
PRPF39-203ENST00000477626 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
PRPF39-203ENST00000477626 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-203ENST00000477626 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
PRPF39-203ENST00000477626 SEPT2Q15019 361 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 HSD3B7Q9H2F3 369 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 TMX2Q9Y320 296 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms