RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MTMR10Q9NXD2 777 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 PEX10O60683 326 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 FLOT1O75955 427 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 PPARAQ07869 468 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 Q3C1V9 767 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 CCDC129Q6ZRS4 1044 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 NECAB2Q7Z6G3 386 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 PLEKHH3Q7Z736 793 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 SPICE1Q8N0Z3 855 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 MCM3APO60318 1980 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 PLIN4Q96Q06 1357 aa13.56□□□□□ -0.24
NUDCD3-206ENST00000475952 TTC28Q96AY4 2481 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 RAD21O60216 631 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 CNMDO75829 334 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 RGS2P41220 211 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 SIAH1Q8IUQ4 282 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 MB21D1Q8N884 522 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 OSBPL3Q9H4L5 887 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 IVNS1ABPQ9Y6Y0 642 aa13.55□□□□□ -0.24
NUDCD3-206ENST00000475952 PRDM1O75626 825 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 CYP2B6P20813 491 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 DSG3P32926 999 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 MAGEA10P43363 369 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 APBA2Q99767 749 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 BTBD7Q9P203 1132 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
NUDCD3-206ENST00000475952 SMCHD1A6NHR9 2005 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 A0A0D9SFI3 127 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 SYN1P17600 705 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 TRIB2Q92519 343 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 SPATC1LQ9H0A9 340 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 ZMYM6O95789 1325 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
NUDCD3-206ENST00000475952 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 SLC15A5A6NIM6 579 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 FOXP2O15409 715 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 TTLL1O95922 423 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 PLS1Q14651 629 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 MORN1Q5T089 497 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 ATG4CQ96DT6 458 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 CEP95Q96GE4 821 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 MOV10L1Q9BXT6 1211 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 HMX1Q9NP08 348 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 SYNPO2Q9UMS6 1093 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 RPTORQ8N122 1335 aa13.52□□□□□ -0.25
NUDCD3-206ENST00000475952 HIP1O00291 1037 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 PTPREP23469 700 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 GRB14Q14449 540 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 NEDD1Q8NHV4 660 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 USP6NLQ92738 828 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 CLIP2Q9UDT6 1046 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 ANAPC4Q9UJX5 808 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
NUDCD3-206ENST00000475952 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 F5H6K3 240 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 NDUFB10O96000 172 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 ERCC3P19447 782 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 SDSP20132 328 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 TFAP4Q01664 338 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 KLRC3Q07444 240 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 ALX1Q15699 326 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 FAM47AQ5JRC9 791 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 NCAPG2Q86XI2 1143 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms