RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.33
CDRT1-205ENST00000475944 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.33
CDRT1-205ENST00000475944 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-205ENST00000475944 MMP19Q99542 508 aa13.02□□□□□ -0.33
CDRT1-205ENST00000475944 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
CDRT1-205ENST00000475944 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.33
CDRT1-205ENST00000475944 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
CDRT1-205ENST00000475944 COPB2P35606 906 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 KCTD2Q14681 263 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 SNX17Q15036 470 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 LRRC41Q15345 812 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
CDRT1-205ENST00000475944 CTR9Q6PD62 1173 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 LRRCC1Q9C099 1032 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 PRDM5Q9NQX1 630 aaPredicted RBP13.01□□□□□ -0.33
CDRT1-205ENST00000475944 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
CDRT1-205ENST00000475944 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 MYH7P12883 1935 aa13.01□□□□□ -0.33
CDRT1-205ENST00000475944 COL6A3P12111 3177 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 SMIM22K7EJ46 135 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 RAD21O60216 631 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 RARBP10826 455 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 TRIM60Q495X7 471 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 C1orf53Q5VUE5 145 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
CDRT1-205ENST00000475944 XPNPEP3Q9NQH7 507 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
CDRT1-205ENST00000475944 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
CDRT1-205ENST00000475944 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-205ENST00000475944 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 VWA5AO00534 786 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 CHGBP05060 677 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 STAT3P40763 770 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 RNF180Q86T96 592 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 FERMT2Q96AC1 680 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 TINF2Q9BSI4 451 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
CDRT1-205ENST00000475944 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-205ENST00000475944 PGK2P07205 417 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 ZNF792Q3KQV3 632 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 GIMAP6Q6P9H5 292 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 BADQ92934 168 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 MKNK2Q9HBH9 465 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 PHF24Q9UPV7 400 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 CNPY2Q9Y2B0 182 aa12.98□□□□□ -0.33
CDRT1-205ENST00000475944 AKR1A1P14550 325 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 SHHQ15465 462 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
CDRT1-205ENST00000475944 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 REPS2Q8NFH8 660 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 STRBPQ96SI9 672 aaKnown RBP12.97□□□□□ -0.33
CDRT1-205ENST00000475944 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 TEX13BQ9BXU2 312 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-205ENST00000475944 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 DNAH12Q6ZR08 3092 aa12.97□□□□□ -0.33
CDRT1-205ENST00000475944 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 PGK1P00558 417 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 RASA1P20936 1047 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 TLE2Q04725 743 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 SNRNP48Q6IEG0 339 aaKnown RBP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 PRPF38AQ8NAV1 312 aaKnown RBP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 APPBP2Q92624 585 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
CDRT1-205ENST00000475944 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-205ENST00000475944 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 A0A1W2PQ45 241 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 A0A1W2PQY0 241 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 TRIM43BA6NCK2 446 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 F5H6K3 240 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 ZFYP08048 801 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 CLTBP09497 229 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 ZNF865P0CJ78 1059 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 TAL1P17542 331 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 GNAT2P19087 354 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 KLRC3Q07444 240 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 C9orf50Q5SZB4 431 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1375.1 ms