RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 IGFBP4P22692 258 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 DSG3P32926 999 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 SHMT1P34896 483 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 DYNLL1P63167 89 aaKnown RBP17■□□□□ 0.31
FAM3A-218ENST00000475657 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 GPR108Q9NPR9 543 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 ELP1O95163 1332 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 A0A1W2PRG0 241 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-218ENST00000475657 USP5P45974 858 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 CDK7P50613 346 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 TMED8Q6PL24 325 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-218ENST00000475657 TMEM199Q8N511 208 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 KLHDC9Q8NEP7 349 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 LRFN3Q9BTN0 628 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 CHD7Q9P2D1 2997 aa16.99■□□□□ 0.31
FAM3A-218ENST00000475657 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 CYP7A1P22680 504 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 RARSP54136 660 aaKnown RBP16.98■□□□□ 0.31
FAM3A-218ENST00000475657 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
FAM3A-218ENST00000475657 PLS1Q14651 629 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 SEPT2Q15019 361 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 CCSAPQ6IQ19 270 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-218ENST00000475657 ZNF365Q70YC5 407 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 HERVK_113Q902F9 699 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 NECAB3Q96P71 396 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-218ENST00000475657 SLC28A3Q9HAS3 691 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 A0A0G2JMZ2 1700 aa16.98■□□□□ 0.31
FAM3A-218ENST00000475657 CSF2RAP15509 400 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 TAL1P17542 331 aaPredicted RBP16.97■□□□□ 0.31
FAM3A-218ENST00000475657 GABPAQ06546 454 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
FAM3A-218ENST00000475657 GLT1D1Q96MS3 346 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
FAM3A-218ENST00000475657 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
FAM3A-218ENST00000475657 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
FAM3A-218ENST00000475657 ERC2O15083 957 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 CST5P28325 142 aaPredicted RBP16.96■□□□□ 0.31
FAM3A-218ENST00000475657 PLCD1P51178 756 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 KCTD2Q14681 263 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 KCNA10Q16322 511 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 MMP19Q99542 508 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 XIRP2A4UGR9 3374 aa16.96■□□□□ 0.31
FAM3A-218ENST00000475657 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.3
FAM3A-218ENST00000475657 FLOT1O75955 427 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
FAM3A-218ENST00000475657 ZAP70P43403 619 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 TMEM132BQ14DG7 1078 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 TMEM31Q5JXX7 168 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
FAM3A-218ENST00000475657 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 IL23AQ9NPF7 189 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 FAM184BQ9ULE4 1060 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 MYH1P12882 1939 aa16.95■□□□□ 0.3
FAM3A-218ENST00000475657 DUSP11O75319 330 aaKnown RBP16.94■□□□□ 0.3
FAM3A-218ENST00000475657 BCAR3O75815 825 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 PGK2P07205 417 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 ACRP10323 421 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-218ENST00000475657 COPB2P35606 906 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 KIAA1755Q5JYT7 1200 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
FAM3A-218ENST00000475657 NKX2-4Q9H2Z4 354 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 EPHX3Q9H6B9 360 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
FAM3A-218ENST00000475657 ARVCFO00192 962 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 TFF2Q03403 129 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 FAM126BQ8IXS8 530 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
FAM3A-218ENST00000475657 YBX2Q9Y2T7 364 aaKnown RBP16.93■□□□□ 0.3
FAM3A-218ENST00000475657 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
FAM3A-218ENST00000475657 TCF20Q9UGU0 1960 aaKnown RBP16.93■□□□□ 0.3
FAM3A-218ENST00000475657 ZNFX1Q9P2E3 1918 aaKnown RBP16.92■□□□□ 0.3
FAM3A-218ENST00000475657 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-218ENST00000475657 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
FAM3A-218ENST00000475657 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
FAM3A-218ENST00000475657 GPR37L1O60883 481 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
FAM3A-218ENST00000475657 FGBP02675 491 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 VCPKMTQ9H867 229 aa16.92■□□□□ 0.3
FAM3A-218ENST00000475657 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
FAM3A-218ENST00000475657 CD4P01730 458 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 GNAI2P04899 355 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms