RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PRAMEF19Q5SWL8 479 aa29.95■■■□□ 2.39
TMEM54-205ENST00000475208 MAML3Q96JK9 1138 aa29.95■■■□□ 2.39
TMEM54-205ENST00000475208 ATP11BQ9Y2G3 1177 aa29.95■■■□□ 2.39
TMEM54-205ENST00000475208 STXBP5LQ9Y2K9 1186 aa29.95■■■□□ 2.39
TMEM54-205ENST00000475208 DLL1O00548 723 aa29.94■■■□□ 2.38
TMEM54-205ENST00000475208 SLC25A27O95847 323 aa29.94■■■□□ 2.38
TMEM54-205ENST00000475208 MYCNP04198 464 aaPredicted RBP29.94■■■□□ 2.38
TMEM54-205ENST00000475208 CTR9Q6PD62 1173 aa29.94■■■□□ 2.38
TMEM54-205ENST00000475208 PUS7LQ9H0K6 701 aaKnown RBP29.94■■■□□ 2.38
TMEM54-205ENST00000475208 KANSL2Q9H9L4 492 aa29.94■■■□□ 2.38
TMEM54-205ENST00000475208 FBXO28Q9NVF7 368 aa29.94■■■□□ 2.38
TMEM54-205ENST00000475208 ZSCAN25Q6NSZ9 544 aa29.93■■■□□ 2.38
TMEM54-205ENST00000475208 LRRCC1Q9C099 1032 aa29.93■■■□□ 2.38
TMEM54-205ENST00000475208 COL11A1P12107 1806 aaPredicted RBP29.92■■■□□ 2.38
TMEM54-205ENST00000475208 LTBP2Q14767 1821 aa29.92■■■□□ 2.38
TMEM54-205ENST00000475208 SLC39A5Q6ZMH5 540 aa29.92■■■□□ 2.38
TMEM54-205ENST00000475208 MMP19Q99542 508 aa29.92■■■□□ 2.38
TMEM54-205ENST00000475208 ADAMTS5Q9UNA0 930 aa29.92■■■□□ 2.38
TMEM54-205ENST00000475208 SMARCA5O60264 1052 aaPredicted RBP29.91■■■□□ 2.38
TMEM54-205ENST00000475208 FAM47AQ5JRC9 791 aa29.91■■■□□ 2.38
TMEM54-205ENST00000475208 GOPCQ9HD26 462 aa29.91■■■□□ 2.38
TMEM54-205ENST00000475208 ARPP21Q9UBL0 812 aaPredicted RBP29.91■■■□□ 2.38
TMEM54-205ENST00000475208 RAD21O60216 631 aa29.9■■■□□ 2.38
TMEM54-205ENST00000475208 LRRC41Q15345 812 aa29.9■■■□□ 2.38
TMEM54-205ENST00000475208 RIOX2Q8IUF8 465 aa29.9■■■□□ 2.38
TMEM54-205ENST00000475208 RCAN3Q9UKA8 241 aa29.9■■■□□ 2.38
TMEM54-205ENST00000475208 PPP1R9AQ9ULJ8 1098 aa29.9■■■□□ 2.38
TMEM54-205ENST00000475208 PGK2P07205 417 aa29.89■■■□□ 2.38
TMEM54-205ENST00000475208 TRIM60Q495X7 471 aa29.89■■■□□ 2.38
TMEM54-205ENST00000475208 FAM83BQ5T0W9 1011 aa29.89■■■□□ 2.38
TMEM54-205ENST00000475208 PRDM5Q9NQX1 630 aaPredicted RBP29.89■■■□□ 2.38
TMEM54-205ENST00000475208 VWA5AO00534 786 aa29.88■■■□□ 2.37
TMEM54-205ENST00000475208 ADCYAP1R1P41586 468 aa29.88■■■□□ 2.37
TMEM54-205ENST00000475208 SNX17Q15036 470 aa29.88■■■□□ 2.37
TMEM54-205ENST00000475208 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.88■■■□□ 2.37
TMEM54-205ENST00000475208 NRBP1Q9UHY1 535 aa29.88■■■□□ 2.37
TMEM54-205ENST00000475208 ZNFX1Q9P2E3 1918 aaKnown RBP29.88■■■□□ 2.37
TMEM54-205ENST00000475208 STAT3P40763 770 aa29.87■■■□□ 2.37
TMEM54-205ENST00000475208 KCTD2Q14681 263 aa29.87■■■□□ 2.37
TMEM54-205ENST00000475208 FERMT2Q96AC1 680 aa29.87■■■□□ 2.37
TMEM54-205ENST00000475208 STRBPQ96SI9 672 aaKnown RBP29.87■■■□□ 2.37
TMEM54-205ENST00000475208 ZNF214Q9UL59 606 aaPredicted RBP29.87■■■□□ 2.37
TMEM54-205ENST00000475208 A0A0C4DFX4 3053 aa29.87■■■□□ 2.37
TMEM54-205ENST00000475208 GREB1LQ9C091 1923 aaPredicted RBP29.86■■■□□ 2.37
TMEM54-205ENST00000475208 C20orf194Q5TEA3 1177 aa29.86■■■□□ 2.37
TMEM54-205ENST00000475208 REPS2Q8NFH8 660 aa29.86■■■□□ 2.37
TMEM54-205ENST00000475208 ECHDC1Q9NTX5 307 aa29.86■■■□□ 2.37
TMEM54-205ENST00000475208 LAMA2P24043 3122 aaKnown RBP29.86■■■□□ 2.37
TMEM54-205ENST00000475208 RARBP10826 455 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 COPB2P35606 906 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 ZNF792Q3KQV3 632 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 STK11IPQ8N1F8 1099 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 TINF2Q9BSI4 451 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 XPNPEP3Q9NQH7 507 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 PDLIM7Q9NR12 457 aa29.85■■■□□ 2.37
TMEM54-205ENST00000475208 DIS3Q9Y2L1 958 aaKnown RBP29.85■■■□□ 2.37
TMEM54-205ENST00000475208 POTEB2H3BUK9 544 aa29.84■■■□□ 2.37
TMEM54-205ENST00000475208 SBK1Q52WX2 424 aa29.84■■■□□ 2.37
TMEM54-205ENST00000475208 FAM109BQ6ICB4 259 aaPredicted RBP29.84■■■□□ 2.37
TMEM54-205ENST00000475208 NUP88Q99567 741 aaPredicted RBP29.84■■■□□ 2.37
TMEM54-205ENST00000475208 PLXNA1Q9UIW2 1896 aa29.84■■■□□ 2.37
TMEM54-205ENST00000475208 RASA1P20936 1047 aa29.83■■■□□ 2.37
TMEM54-205ENST00000475208 MKNK2Q9HBH9 465 aa29.83■■■□□ 2.37
TMEM54-205ENST00000475208 PHF24Q9UPV7 400 aa29.83■■■□□ 2.37
TMEM54-205ENST00000475208 ROBO3Q96MS0 1386 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 GSG1L2A8MUP6 293 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 TAL1P17542 331 aaPredicted RBP29.82■■■□□ 2.36
TMEM54-205ENST00000475208 C1orf53Q5VUE5 145 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 KBTBD3Q8NAB2 608 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 BADQ92934 168 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 SLF1Q9BQI6 1058 aa29.82■■■□□ 2.36
TMEM54-205ENST00000475208 MINDY4BA8MYZ0 360 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 PGK1P00558 417 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 SHHQ15465 462 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 GIMAP6Q6P9H5 292 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 SH3RF1Q7Z6J0 888 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 APPBP2Q92624 585 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 OSBP2Q969R2 916 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 FAM161BQ96MY7 647 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 GUCD1Q96NT3 240 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 NYAP2Q9P242 653 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 SMCHD1A6NHR9 2005 aa29.81■■■□□ 2.36
TMEM54-205ENST00000475208 NDUFB10O96000 172 aa29.8■■■□□ 2.36
TMEM54-205ENST00000475208 C9orf50Q5SZB4 431 aa29.8■■■□□ 2.36
TMEM54-205ENST00000475208 RNF180Q86T96 592 aa29.8■■■□□ 2.36
TMEM54-205ENST00000475208 TEX13BQ9BXU2 312 aa29.8■■■□□ 2.36
TMEM54-205ENST00000475208 TRIM43BA6NCK2 446 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 F5H6K3 240 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 ZNF865P0CJ78 1059 aaPredicted RBP29.79■■■□□ 2.36
TMEM54-205ENST00000475208 AKR1A1P14550 325 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 TLE2Q04725 743 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 KLRC3Q07444 240 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 TSHZ3Q63HK5 1081 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 SNRNP48Q6IEG0 339 aaKnown RBP29.79■■■□□ 2.36
TMEM54-205ENST00000475208 TRIM43Q96BQ3 446 aaPredicted RBP29.79■■■□□ 2.36
TMEM54-205ENST00000475208 GPATCH3Q96I76 525 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 CNPY2Q9Y2B0 182 aa29.79■■■□□ 2.36
TMEM54-205ENST00000475208 ZNF697Q5TEC3 545 aa29.78■■■□□ 2.36
TMEM54-205ENST00000475208 LENG1Q96BZ8 264 aaPredicted RBP29.78■■■□□ 2.36
TMEM54-205ENST00000475208 EPB41L4AQ9HCS5 686 aaPredicted RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms