RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 EVI5LQ96CN4 794 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
PDPN-204ENST00000475043 GJD2Q9UKL4 321 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
PDPN-204ENST00000475043 HMGCRP04035 888 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
PDPN-204ENST00000475043 GJA8P48165 433 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
PDPN-204ENST00000475043 GPR142Q7Z601 462 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 PLEKHH3Q7Z736 793 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 SIAH1Q8IUQ4 282 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 U2AF1L4Q8WU68 220 aaKnown RBP11.25□□□□□ -0.61
PDPN-204ENST00000475043 SOCS4Q8WXH5 440 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 LPAR1Q92633 364 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 NAPBQ9H115 298 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 VCPKMTQ9H867 229 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 STAP2Q9UGK3 403 aa11.25□□□□□ -0.61
PDPN-204ENST00000475043 KIAA0100Q14667 2235 aaKnown RBP11.24□□□□□ -0.61
PDPN-204ENST00000475043 PARP14Q460N5 1801 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 PRDM1O75626 825 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 CNMDO75829 334 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 FLOT1O75955 427 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 SGPL1O95470 568 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 IGHDP01880 384 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 TFRCP02786 760 aaKnown RBP11.24□□□□□ -0.61
PDPN-204ENST00000475043 RASA1P20936 1047 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
PDPN-204ENST00000475043 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 IVNS1ABPQ9Y6Y0 642 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 RLFQ13129 1914 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
PDPN-204ENST00000475043 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 ROBO3Q96MS0 1386 aa11.24□□□□□ -0.61
PDPN-204ENST00000475043 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
PDPN-204ENST00000475043 WDR46O15213 610 aaKnown RBP11.23□□□□□ -0.61
PDPN-204ENST00000475043 SLC3A2P08195 630 aaKnown RBP11.23□□□□□ -0.61
PDPN-204ENST00000475043 RGS2P41220 211 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 TRIM32Q13049 653 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 PLS1Q14651 629 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 TRIB2Q92519 343 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
PDPN-204ENST00000475043 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDPN-204ENST00000475043 HMX1Q9NP08 348 aaPredicted RBP11.23□□□□□ -0.61
PDPN-204ENST00000475043 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 MKI67P46013 3256 aaKnown RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 NUCB1Q02818 461 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 PDE4BQ07343 736 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 PPARAQ07869 468 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 MORN1Q5T089 497 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 ATG4CQ96DT6 458 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 APBA2Q99767 749 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDPN-204ENST00000475043 SPATC1LQ9H0A9 340 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 PAK6Q9NQU5 681 aaPredicted RBP11.22□□□□□ -0.61
PDPN-204ENST00000475043 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
PDPN-204ENST00000475043 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 FARP2O94887 1054 aaPredicted RBP11.21□□□□□ -0.61
PDPN-204ENST00000475043 TSPY3P0CV98 308 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 TSPY8P0CW00 308 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 PTPREP23469 700 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 MAP2K5Q13163 448 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 CCL14Q16627 93 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
PDPN-204ENST00000475043 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 USP6NLQ92738 828 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 DPF3Q92784 378 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 HS3ST6Q96QI5 342 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
PDPN-204ENST00000475043 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
PDPN-204ENST00000475043 A0A0D9SFI3 127 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms