RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 SLC5A4Q9NY91 659 aa17.27■□□□□ 0.36
COL2A1-205ENST00000474996 SEPT4O43236 478 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 ARRDC4Q8NCT1 418 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 LBHD1Q9BQE6 289 aaPredicted RBP17.26■□□□□ 0.35
COL2A1-205ENST00000474996 KANSL2Q9H9L4 492 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 FBXO28Q9NVF7 368 aa17.26■□□□□ 0.35
COL2A1-205ENST00000474996 RAD21O60216 631 aa17.25■□□□□ 0.35
COL2A1-205ENST00000474996 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
COL2A1-205ENST00000474996 FCER1AP12319 257 aa17.25■□□□□ 0.35
COL2A1-205ENST00000474996 RTP1P59025 263 aa17.25■□□□□ 0.35
COL2A1-205ENST00000474996 ADAMTS5Q9UNA0 930 aa17.25■□□□□ 0.35
COL2A1-205ENST00000474996 SMCHD1A6NHR9 2005 aa17.25■□□□□ 0.35
COL2A1-205ENST00000474996 PLXNA1Q9UIW2 1896 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 GREB1LQ9C091 1923 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-205ENST00000474996 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 SLC25A27O95847 323 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 MMP19Q99542 508 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL2A1-205ENST00000474996 GOPCQ9HD26 462 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 ARPP21Q9UBL0 812 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-205ENST00000474996 PRKAG2Q9UGJ0 569 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
COL2A1-205ENST00000474996 PGK2P07205 417 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 FAM47AQ5JRC9 791 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 FAM83BQ5T0W9 1011 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
COL2A1-205ENST00000474996 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 MTMR10Q9NXD2 777 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
COL2A1-205ENST00000474996 VWA5AO00534 786 aa17.22■□□□□ 0.35
COL2A1-205ENST00000474996 LRRC41Q15345 812 aa17.22■□□□□ 0.35
COL2A1-205ENST00000474996 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
COL2A1-205ENST00000474996 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.35
COL2A1-205ENST00000474996 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 RASA1P20936 1047 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 STAT3P40763 770 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 KCTD2Q14681 263 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-205ENST00000474996 PRDM5Q9NQX1 630 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-205ENST00000474996 STXBP5LQ9Y2K9 1186 aa17.21■□□□□ 0.35
COL2A1-205ENST00000474996 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 MINDY4BA8MYZ0 360 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 DLL1O00548 723 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 SNX17Q15036 470 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 ZNF792Q3KQV3 632 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 TINF2Q9BSI4 451 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
COL2A1-205ENST00000474996 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 RARBP10826 455 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 TAL1P17542 331 aaPredicted RBP17.19■□□□□ 0.34
COL2A1-205ENST00000474996 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 APPBP2Q92624 585 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 XPNPEP3Q9NQH7 507 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
COL2A1-205ENST00000474996 DIS3Q9Y2L1 958 aaKnown RBP17.19■□□□□ 0.34
COL2A1-205ENST00000474996 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 F5H6K3 240 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
COL2A1-205ENST00000474996 GPAA1O43292 621 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 NDUFB10O96000 172 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 COPB2P35606 906 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 KLRC3Q07444 240 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 SLF1Q9BQI6 1058 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 EPB41L4AQ9HCS5 686 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-205ENST00000474996 PDLIM7Q9NR12 457 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
COL2A1-205ENST00000474996 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 PGK1P00558 417 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 TDO2P48775 406 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 SHHQ15465 462 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 SNRNP48Q6IEG0 339 aaKnown RBP17.17■□□□□ 0.34
COL2A1-205ENST00000474996 SH3RF1Q7Z6J0 888 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 BADQ92934 168 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 LENG1Q96BZ8 264 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-205ENST00000474996 TEX13BQ9BXU2 312 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 PHF24Q9UPV7 400 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
COL2A1-205ENST00000474996 M0R2C6 588 aa17.16■□□□□ 0.34
COL2A1-205ENST00000474996 PRDM1O75626 825 aa17.16■□□□□ 0.34
COL2A1-205ENST00000474996 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-205ENST00000474996 ZNF865P0CJ78 1059 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-205ENST00000474996 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
COL2A1-205ENST00000474996 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms