RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
ARPC1B-216ENST00000474880 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
ARPC1B-216ENST00000474880 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 WDR46O15213 610 aaKnown RBP13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 CCNA1P78396 465 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 TFAP4Q01664 338 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
ARPC1B-216ENST00000474880 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 ORC4O43929 436 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 FLOT1O75955 427 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 FARP2O94887 1054 aaPredicted RBP13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 TTLL1O95922 423 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 TFRCP02786 760 aaKnown RBP13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 HAND2P61296 217 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 CCL14Q16627 93 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 DSCC1Q9BVC3 393 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
ARPC1B-216ENST00000474880 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 ZNF213O14771 459 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 PTPREP23469 700 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 CHMLP26374 656 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 DSG3P32926 999 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 RGS2P41220 211 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 MAP2K5Q13163 448 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 ATG4CQ96DT6 458 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 APBA2Q99767 749 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 MOV10L1Q9BXT6 1211 aaKnown RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 SPATC1LQ9H0A9 340 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
ARPC1B-216ENST00000474880 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 FGRP09769 529 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 NT5C2P49902 561 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 MKL1Q969V6 931 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 FLRT1Q9NZU1 646 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
ARPC1B-216ENST00000474880 F5H6K3 240 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 NDUFB10O96000 172 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 ERCC3P19447 782 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 KLRC3Q07444 240 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 GRB14Q14449 540 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 FAM83BQ5T0W9 1011 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 ESR2Q92731 530 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 ADAMTS5Q9UNA0 930 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
ARPC1B-216ENST00000474880 H0YGN5 161 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 SGSM2O43147 1006 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 HOXC6P09630 235 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 CAPN2P17655 700 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 PLS1Q14651 629 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 GMCL1P1Q8NEA9 526 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 DPF3Q92784 378 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 PPP1R9AQ9ULJ8 1098 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 ISY1Q9ULR0 285 aaKnown RBP13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 MCM3APO60318 1980 aa13.07□□□□□ -0.32
ARPC1B-216ENST00000474880 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
ARPC1B-216ENST00000474880 VWA5AO00534 786 aa13.06□□□□□ -0.32
ARPC1B-216ENST00000474880 STRNO43815 780 aa13.06□□□□□ -0.32
ARPC1B-216ENST00000474880 IGHA2P01877 340 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms