RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ZNF444Q8N0Y2 327 aaPredicted RBP24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 NPLOC4Q8TAT6 608 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 NYAP2Q9P242 653 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 ADAMTS5Q9UNA0 930 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 RAD21O60216 631 aa24.29■■□□□ 1.48
PDLIM4-206ENST00000474421 SLC3A2P08195 630 aaKnown RBP24.29■■□□□ 1.48
PDLIM4-206ENST00000474421 HDAC1Q13547 482 aaPredicted RBP24.29■■□□□ 1.48
PDLIM4-206ENST00000474421 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
PDLIM4-206ENST00000474421 OLFML2BQ68BL8 750 aa24.29■■□□□ 1.48
PDLIM4-206ENST00000474421 COPB2P35606 906 aa24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 ZMYM1Q5SVZ6 1142 aa24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 STK11IPQ8N1F8 1099 aa24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 RBM27Q9P2N5 1060 aaKnown RBP24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 PPP1R9AQ9ULJ8 1098 aa24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 COL11A1P12107 1806 aaPredicted RBP24.28■■□□□ 1.48
PDLIM4-206ENST00000474421 RANBP2P49792 3224 aaKnown RBP24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 FRMPD3Q5JV73 1810 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 FCER1AP12319 257 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 PDE4BQ07343 736 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 TMEM132BQ14DG7 1078 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 FAM83BQ5T0W9 1011 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 NAPBQ9H115 298 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 DDX20Q9UHI6 824 aaKnown RBP24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 SYNPO2Q9UMS6 1093 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 SALL3Q9BXA9 1300 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 ZNFX1Q9P2E3 1918 aaKnown RBP24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 MYH4Q9Y623 1939 aa24.27■■□□□ 1.48
PDLIM4-206ENST00000474421 VWA5AO00534 786 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 IGHA2P01877 340 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 CNGA1P29973 690 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 CYP2C19P33261 490 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 RIOX2Q8IUF8 465 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 C7orf61Q8IZ16 206 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 SEC62Q99442 399 aaKnown RBP24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 PRO3102Q9H379 93 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 FBXO28Q9NVF7 368 aa24.26■■□□□ 1.47
PDLIM4-206ENST00000474421 IGKV6D-41A0A0C4DH26 115 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 A0A1W2PPC1 479 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 F5H6K3 240 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 COL6A1P12109 1028 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 STAT3P40763 770 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 KLRC3Q07444 240 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 EVI5LQ96CN4 794 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 CLIP2Q9UDT6 1046 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 STAP2Q9UGK3 403 aa24.25■■□□□ 1.47
PDLIM4-206ENST00000474421 COBLO75128 1261 aa24.24■■□□□ 1.47
PDLIM4-206ENST00000474421 CYBAP13498 195 aa24.24■■□□□ 1.47
PDLIM4-206ENST00000474421 MKL1Q969V6 931 aa24.24■■□□□ 1.47
PDLIM4-206ENST00000474421 SLF1Q9BQI6 1058 aa24.24■■□□□ 1.47
PDLIM4-206ENST00000474421 PFASO15067 1338 aa24.24■■□□□ 1.47
PDLIM4-206ENST00000474421 PRDM1O75626 825 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 TTLL1O95922 423 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 NDUFB10O96000 172 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 TICAM2Q86XR7 235 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 YTHDC1Q96MU7 727 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 MMP19Q99542 508 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 MTMR4Q9NYA4 1195 aa24.23■■□□□ 1.47
PDLIM4-206ENST00000474421 PLIN4Q96Q06 1357 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 TSPY3P0CV98 308 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 TSPY8P0CW00 308 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 PDE1AP54750 535 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 PPARAQ07869 468 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 KCTD2Q14681 263 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 PPP4R3BQ5MIZ7 849 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 PRPF38AQ8NAV1 312 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 CEP95Q96GE4 821 aa24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 ZNF214Q9UL59 606 aaPredicted RBP24.22■■□□□ 1.47
PDLIM4-206ENST00000474421 TRPV1Q8NER1 839 aa24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 REPS2Q8NFH8 660 aa24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 NEDD1Q8NHV4 660 aa24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 MAML3Q96JK9 1138 aa24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 NUP88Q99567 741 aaPredicted RBP24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 TEX13BQ9BXU2 312 aa24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 DIS3Q9Y2L1 958 aaKnown RBP24.21■■□□□ 1.47
PDLIM4-206ENST00000474421 DNM1LO00429 736 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 SEPT4O43236 478 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 ARRDC4Q8NCT1 418 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 GMCL1P1Q8NEA9 526 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 NRBP1Q9UHY1 535 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 FEM1BQ9UK73 627 aa24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 CTDP1Q9Y5B0 961 aaPredicted RBP24.2■■□□□ 1.46
PDLIM4-206ENST00000474421 ZBED4O75132 1171 aa24.19■■□□□ 1.46
PDLIM4-206ENST00000474421 RWDD1Q9H446 243 aaPredicted RBP24.19■■□□□ 1.46
PDLIM4-206ENST00000474421 HELLSQ9NRZ9 838 aa24.19■■□□□ 1.46
PDLIM4-206ENST00000474421 ZMYND8Q9ULU4 1186 aaPredicted RBP24.19■■□□□ 1.46
PDLIM4-206ENST00000474421 PLXNA1Q9UIW2 1896 aa24.19■■□□□ 1.46
PDLIM4-206ENST00000474421 BMP8BP34820 402 aa24.18■■□□□ 1.46
PDLIM4-206ENST00000474421 TFAP4Q01664 338 aa24.18■■□□□ 1.46
PDLIM4-206ENST00000474421 ATP2A1O14983 1001 aa24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 FAM47AQ5JRC9 791 aa24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 SNRNP48Q6IEG0 339 aaKnown RBP24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 CCDC129Q6ZRS4 1044 aa24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 GDF15Q99988 308 aa24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 SENP6Q9GZR1 1112 aaPredicted RBP24.17■■□□□ 1.46
PDLIM4-206ENST00000474421 DNAH12Q6ZR08 3092 aa24.16■■□□□ 1.46
PDLIM4-206ENST00000474421 FDX1P10109 184 aa24.16■■□□□ 1.46
PDLIM4-206ENST00000474421 LRRC26Q2I0M4 334 aa24.16■■□□□ 1.46
PDLIM4-206ENST00000474421 ZNF792Q3KQV3 632 aa24.16■■□□□ 1.46
PDLIM4-206ENST00000474421 SLFN13Q68D06 897 aa24.16■■□□□ 1.46
PDLIM4-206ENST00000474421 LRRC47Q8N1G4 583 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms