RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 TRIM43BA6NCK2 446 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ZNF316A6NFI3 1004 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 KBTBD13C9JR72 458 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 SEPT4O43236 478 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 IGSF3O75054 1194 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 FOSL2P15408 326 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 CYP7A1P22680 504 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ADORA2AP29274 412 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 SHMT1P34896 483 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ZAP70P43403 619 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 TRIM60Q495X7 471 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 TNNI3KQ59H18 835 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 C1orf53Q5VUE5 145 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ANO1Q5XXA6 986 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 SH3RF1Q7Z6J0 888 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 MIGA1Q8NAN2 632 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ARRDC4Q8NCT1 418 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ARHGAP45Q92619 1136 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 TRIM43Q96BQ3 446 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 MOV10L1Q9BXT6 1211 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 RPAP3Q9H6T3 665 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 PRDM5Q9NQX1 630 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 FPGT-TNNI3KV9GXZ4 949 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 MYO5AQ9Y4I1 1855 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 A0A0G2JMZ2 1700 aa6.27□□□□□ -1.41
SNRNP40-204ENST00000474025 STRNO43815 780 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 COBLO75128 1261 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 TRIM27P14373 513 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 ITGB8P26012 769 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 GUCY1A2P33402 732 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 ADCYAP1R1P41586 468 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 PLCD1P51178 756 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 EPHB4P54760 987 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 GABPAQ06546 454 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 LRRC41Q15345 812 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 ABCB5Q2M3G0 1257 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 CERKLQ49MI3 558 aaPredicted RBP6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 FAM47AQ5JRC9 791 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 CCDC158Q5M9N0 1113 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 DPP9Q86TI2 863 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 CERS3Q8IU89 383 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 USP38Q8NB14 1042 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 SHCBP1Q8NEM2 672 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 C1QTNF1Q9BXJ1 281 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 SPATC1LQ9H0A9 340 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 DBNLQ9UJU6 430 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 TNNQ9UQP3 1299 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 MYH1P12882 1939 aa6.26□□□□□ -1.41
SNRNP40-204ENST00000474025 TRIOO75962 3097 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 IDH1O75874 414 aaKnown RBP6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 ERCC3P19447 782 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 USP5P45974 858 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 TLE2Q04725 743 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 COG2Q14746 738 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 SEPT2Q15019 361 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 KIAA1755Q5JYT7 1200 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 PRAMEF19Q5SWL8 479 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 TTC6Q86TZ1 520 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 ABRAQ8N0Z2 381 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 MAGEB6Q8N7X4 407 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 IL27Q8NEV9 243 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 KHSRPQ92945 711 aaKnown RBP eCLIP6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 MAML3Q96JK9 1138 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 RIOK1Q9BRS2 568 aaKnown RBP6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 CABP5Q9NP86 173 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 HOXC10Q9NYD6 342 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 TACC3Q9Y6A5 838 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 ROBO3Q96MS0 1386 aa6.25□□□□□ -1.41
SNRNP40-204ENST00000474025 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 KIAA0355O15063 1070 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 CLTBP09497 229 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 DNAJB2P25686 324 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 OS9Q13438 667 aaPredicted RBP6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 GRIN2CQ14957 1233 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 MB21D1Q8N884 522 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 MROH8Q9H579 483 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 ANTXR1Q9H6X2 564 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 XPNPEP3Q9NQH7 507 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 SLC5A4Q9NY91 659 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 NRBP1Q9UHY1 535 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 PHF24Q9UPV7 400 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 HCN4Q9Y3Q4 1203 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 PCDHGA4Q9Y5G9 962 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 NAV1Q8NEY1 1877 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 SYNGAP1Q96PV0 1343 aa6.24□□□□□ -1.41
SNRNP40-204ENST00000474025 MPHOSPH10O00566 681 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 IPO8O15397 1037 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 PQBP1O60828 265 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 SURF6O75683 361 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms