RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 POTEEQ6S8J3 1075 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 PLEKHH3Q7Z736 793 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 ACER1Q8TDN7 264 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 NAPBQ9H115 298 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 SMIM22K7EJ46 135 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 ZYXQ15942 572 aaKnown RBP15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 FAM109BQ6ICB4 259 aaPredicted RBP15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 LPAR1Q92633 364 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 FAM161BQ96MY7 647 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 GUCD1Q96NT3 240 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 LBHD1Q9BQE6 289 aaPredicted RBP15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 SENP6Q9GZR1 1112 aaPredicted RBP15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
SHROOM3-204ENST00000473602 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 A0A1W2PRG0 241 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 RASA1P20936 1047 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 MCMDC2Q4G0Z9 681 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 CATSPERGQ6ZRH7 1159 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 APBA2Q99767 749 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 MKNK2Q9HBH9 465 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 MYH4Q9Y623 1939 aa15.43■□□□□ 0.06
SHROOM3-204ENST00000473602 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 PDE4BQ07343 736 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 PPARAQ07869 468 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 MAP2K5Q13163 448 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 LBX2Q6XYB7 198 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 PLXNB2O15031 1838 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 A0A0G2JMZ2 1700 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 ZMYM6O95789 1325 aa15.42■□□□□ 0.06
SHROOM3-204ENST00000473602 RLFQ13129 1914 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 A0A0D9SFI3 127 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 HIP1O00291 1037 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 FOXP2O15409 715 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 MFAP1P55081 439 aaKnown RBP15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 ALX1Q15699 326 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 MFSD14CQ5VZR4 134 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 CCDC129Q6ZRS4 1044 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 ZNF444Q8N0Y2 327 aaPredicted RBP15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 RPAP3Q9H6T3 665 aaPredicted RBP15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 FLRT1Q9NZU1 646 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 RABGAP1Q9Y3P9 1069 aa15.41■□□□□ 0.06
SHROOM3-204ENST00000473602 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 EYSQ5T1H1 3165 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 CNMDO75829 334 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 EEF2P13639 858 aaKnown RBP15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 SDSP20132 328 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 NMIQ13287 307 aaPredicted RBP15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 SYNPO2Q9UMS6 1093 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 CCDC171Q6TFL3 1326 aa15.4■□□□□ 0.06
SHROOM3-204ENST00000473602 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 PTPREP23469 700 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 CNGA1P29973 690 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 CCNA1P78396 465 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 ATP2B2Q01814 1243 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 COG2Q14746 738 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 HOXC10Q9NYD6 342 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 NYAP2Q9P242 653 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 ANAPC4Q9UJX5 808 aa15.39■□□□□ 0.05
SHROOM3-204ENST00000473602 PRUNE2Q8WUY3 3088 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 IGKV6D-41A0A0C4DH26 115 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 SPDYE16A6NNV3 312 aaPredicted RBP15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 PDE4AP27815 886 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 PPP4R3BQ5MIZ7 849 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 TTC22Q5TAA0 569 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 ZNF697Q5TEC3 545 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 STK11IPQ8N1F8 1099 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 PRKAG2Q9UGJ0 569 aa15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 SPTBN5Q9NRC6 3674 aaKnown RBP15.38■□□□□ 0.05
SHROOM3-204ENST00000473602 DNM1LO00429 736 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 MSCO60682 206 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 PRDM1O75626 825 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 HSPD1P10809 573 aaKnown RBP15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 CYP2C19P33261 490 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 RTP1P59025 263 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 TRPV1Q8NER1 839 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 NEDD1Q8NHV4 660 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 CDX2Q99626 313 aaPredicted RBP15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHROOM3-204ENST00000473602 FGAP02671 866 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms