RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 RPAP3Q9H6T3 665 aaPredicted RBP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 DBNLQ9UJU6 430 aaKnown RBP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 TNNQ9UQP3 1299 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 ATP11BQ9Y2G3 1177 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.07
CKS1B-205ENST00000473344 PLXNB2O15031 1838 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 KBTBD13C9JR72 458 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 STRNO43815 780 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 CNMDO75829 334 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 HOXC6P09630 235 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 PSEN2P49810 448 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 ATP8B2P98198 1209 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 COG2Q14746 738 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
CKS1B-205ENST00000473344 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
CKS1B-205ENST00000473344 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 ACER1Q8TDN7 264 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 SSH3Q8TE77 659 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 TANGO6Q9C0B7 1094 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 PRDM5Q9NQX1 630 aaPredicted RBP8.39□□□□□ -1.07
CKS1B-205ENST00000473344 SLC5A4Q9NY91 659 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 HOXC10Q9NYD6 342 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 TLR7Q9NYK1 1049 aaKnown RBP8.39□□□□□ -1.07
CKS1B-205ENST00000473344 BTBD7Q9P203 1132 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 PRUNE2Q8WUY3 3088 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 ALPK3Q96L96 1907 aa8.39□□□□□ -1.07
CKS1B-205ENST00000473344 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-205ENST00000473344 ADORA2AP29274 412 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 PLCD1P51178 756 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 RTP1P59025 263 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 PLS1Q14651 629 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-205ENST00000473344 GJC2Q5T442 439 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-205ENST00000473344 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 ITPRIPQ8IWB1 547 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 NPLOC4Q8TAT6 608 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 EAF2Q96CJ1 260 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-205ENST00000473344 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 SPTBN5Q9NRC6 3674 aaKnown RBP8.38□□□□□ -1.07
CKS1B-205ENST00000473344 SIPA1L1O43166 1804 aa8.38□□□□□ -1.07
CKS1B-205ENST00000473344 SEPT4O43236 478 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 CYBAP13498 195 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SHMT1P34896 483 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SEPT2Q15019 361 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SLC9C2Q5TAH2 1124 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 ANO1Q5XXA6 986 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 OLFML2BQ68BL8 750 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 AACSQ86V21 672 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 NCAPG2Q86XI2 1143 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 ERC1Q8IUD2 1116 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 GUCD1Q96NT3 240 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
CKS1B-205ENST00000473344 MOV10L1Q9BXT6 1211 aaKnown RBP8.37□□□□□ -1.07
CKS1B-205ENST00000473344 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SPATC1LQ9H0A9 340 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 MROH8Q9H579 483 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 ANTXR1Q9H6X2 564 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 SH2D4AQ9H788 454 aa8.37□□□□□ -1.07
CKS1B-205ENST00000473344 NOP58Q9Y2X3 529 aaKnown RBP8.37□□□□□ -1.07
CKS1B-205ENST00000473344 FLOT1O75955 427 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 FCER1AP12319 257 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 ERCC3P19447 782 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 SHHQ15465 462 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 TRIM60Q495X7 471 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 TMEM179Q6ZVK1 233 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 AMOTL1Q8IY63 956 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 SHCBP1Q8NEM2 672 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 TRPV1Q8NER1 839 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 BADQ92934 168 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 KCNK17Q96T54 332 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 RIOK1Q9BRS2 568 aaKnown RBP8.36□□□□□ -1.07
CKS1B-205ENST00000473344 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
CKS1B-205ENST00000473344 MUC3AQ02505 3323 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 A0A1W2PRG0 241 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 CCER2I3L3R5 266 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 RGS20O76081 388 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 RARBP10826 455 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 GUCY1A2P33402 732 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 HSP90AB4PQ58FF6 505 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 RNF180Q86T96 592 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 ABRAQ8N0Z2 381 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 SPICE1Q8N0Z3 855 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 SDR42E1Q8WUS8 393 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
CKS1B-205ENST00000473344 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 CDX2Q99626 313 aaPredicted RBP8.35□□□□□ -1.07
CKS1B-205ENST00000473344 XPNPEP3Q9NQH7 507 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 SWAP70Q9UH65 585 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 EXOC6BQ9Y2D4 811 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 DOCK3Q8IZD9 2030 aa8.35□□□□□ -1.07
CKS1B-205ENST00000473344 FOCADQ5VW36 1801 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms