RNA–Protein interactions for RNA: ENST00000473243.5

ATP13A1-207, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-207ENST00000473243 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
ATP13A1-207ENST00000473243 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
ATP13A1-207ENST00000473243 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
ATP13A1-207ENST00000473243 DNM3Q9UQ16 869 aa16.49■□□□□ 0.23
ATP13A1-207ENST00000473243 CLEC11AQ9Y240 323 aa16.49■□□□□ 0.23
ATP13A1-207ENST00000473243 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 ADRA2BP18089 450 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 VPS72Q15906 364 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 DCCP43146 1447 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 PRKG1Q13976 671 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 C11orf57Q6ZUT1 292 aaPredicted RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 DCP1AQ9NPI6 582 aaPredicted RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 JCADQ9P266 1359 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 NPR1P16066 1061 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 SPECC1LQ69YQ0 1117 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 TCHPQ9BT92 498 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 POLR3GO15318 223 aaPredicted RBP16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 USP37Q86T82 979 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
ATP13A1-207ENST00000473243 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 TDRD7Q8NHU6 1098 aaKnown RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 MRFAP1L1Q96HT8 127 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CLRN2A0PK11 232 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CDK8P49336 464 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 PGBD1Q96JS3 809 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 NAA15Q9BXJ9 866 aaKnown RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CETN3O15182 167 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 TTLL1O95922 423 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CDC27P30260 824 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 HLTFQ14527 1009 aaKnown RBP eCLIP16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 CCDC122Q5T0U0 273 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
ATP13A1-207ENST00000473243 MACROD2A1Z1Q3 448 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 CDC25AP30304 524 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 ADKP55263 362 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 IFI16Q16666 785 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 GPATCH4Q5T3I0 446 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 CSRNP1Q96S65 589 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 SWAP70Q9UH65 585 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 TRIM14Q14142 442 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 TIGD1Q96MW7 591 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 BMS1Q14692 1282 aaKnown RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 PRR16Q569H4 304 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 FBXO11Q86XK2 927 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 PIGSQ96S52 555 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.23
ATP13A1-207ENST00000473243 SLC16A2P36021 539 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 NRBP1Q9UHY1 535 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 NMT2O60551 498 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 RAPGEF1Q13905 1077 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 MAEAQ7L5Y9 396 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 GRAMD1CQ8IYS0 662 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.223e-6■■■■■ 282.2
ATP13A1-207ENST00000473243 NTSR2O95665 410 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 CKAP4Q07065 602 aaKnown RBP16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 SALL3Q9BXA9 1300 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 RIOK3O14730 519 aaKnown RBP16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 ARFGAP3Q9NP61 516 aa16.45■□□□□ 0.22
ATP13A1-207ENST00000473243 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
ATP13A1-207ENST00000473243 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
ATP13A1-207ENST00000473243 TMOD4Q9NZQ9 345 aa16.44■□□□□ 0.22
ATP13A1-207ENST00000473243 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
ATP13A1-207ENST00000473243 CEP112Q8N8E3 955 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms