RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 CMA1P23946 247 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 FUT2Q10981 343 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 C12orf60Q5U649 245 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 ANO1Q5XXA6 986 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 TOGARAM2Q6ZUX3 1019 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 ZBTB9Q96C00 473 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 DHX58Q96C10 678 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
SCAMP4-207ENST00000472442 C6orf229H3BNL8 230 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
SCAMP4-207ENST00000472442 GSTO1P78417 241 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 PNOCQ13519 176 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 LONRF2Q1L5Z9 754 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 PDILTQ8N807 584 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 GOLGA5Q8TBA6 731 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 RABGGTAQ92696 567 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 EXOC4Q96A65 974 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 SHISA4Q96DD7 197 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 BAG1Q99933 345 aaPredicted RBP15.03■□□□□ -0
SCAMP4-207ENST00000472442 INTS13Q9NVM9 706 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 FANCLQ9NW38 375 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 TUBE1Q9UJT0 475 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 SYKP43405 635 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 GOLGA1Q92805 767 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 KIFC2Q96AC6 838 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 ZSWIM4Q9H7M6 989 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 KCNJ14Q9UNX9 436 aa15.03■□□□□ -0
SCAMP4-207ENST00000472442 MMP10P09238 476 aa15.02■□□□□ -0
SCAMP4-207ENST00000472442 USP5P45974 858 aa15.02■□□□□ -0
SCAMP4-207ENST00000472442 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
SCAMP4-207ENST00000472442 TGFBRAP1Q8WUH2 860 aa15.02■□□□□ -0
SCAMP4-207ENST00000472442 DYNLL2Q96FJ2 89 aa15.02■□□□□ -0
SCAMP4-207ENST00000472442 DEXIO95424 95 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 BAG3O95817 575 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 MMP1P03956 469 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 RXRBP28702 533 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 TRIM29Q14134 588 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 MFSD14BQ5SR56 506 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 WASF1Q92558 559 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 MAP3K14Q99558 947 aa15.02□□□□□ -0.01
SCAMP4-207ENST00000472442 BTBD18B2RXH4 712 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PDE4BQ07343 736 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 KARSQ15046 597 aaKnown RBP15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 SRLQ86TD4 932 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 DESI2Q9BSY9 194 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 GPR75-ASB3A0A0A6YYF3 556 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 GOLGA6L9A6NEM1 432 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 LDHCP07864 332 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 TXLNAP40222 546 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 BTDP43251 543 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PLCD1P51178 756 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 SLC39A14Q15043 492 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PPP2R5BQ15173 497 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PTPAQ15257 358 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 PKN1Q16512 942 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 MSL1Q68DK7 614 aa15.01□□□□□ -0.01
SCAMP4-207ENST00000472442 RIMBP2O15034 1052 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 NPR1P16066 1061 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 ADKP55263 362 aaKnown RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 CCDC12Q8WUD4 166 aaPredicted RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 RNF26Q9BY78 433 aaPredicted RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 IL17RBQ9NRM6 502 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 PSD3Q9NYI0 1048 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 RRP15Q9Y3B9 282 aaKnown RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 CCDC151A5D8V7 595 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 CERS3Q8IU89 383 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 MAPKAPK5Q8IW41 473 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 ROBO3Q96MS0 1386 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 CDK5RAP2Q96SN8 1893 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 TSPY2A6NKD2 308 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 ACTN2P35609 894 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
SCAMP4-207ENST00000472442 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 PDE11AQ9HCR9 933 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 VPS18Q9P253 973 aa15□□□□□ -0.01
SCAMP4-207ENST00000472442 TNS1Q9HBL0 1735 aaKnown RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 hCG_1642624A0A1W2PR95 340 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 MAP2K7O14733 419 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 DDAH1O94760 285 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 RHBDL3P58872 404 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 GTF2IP78347 998 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 MCM6Q14566 821 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 SHC4Q6S5L8 630 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 NOSTRINQ8IVI9 506 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 TC2NQ8N9U0 490 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 SLC44A5Q8NCS7 719 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 FAM163AQ96GL9 167 aaPredicted RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 IRX2Q9BZI1 471 aaPredicted RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 STX10O60499 249 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 TOB1P50616 345 aaPredicted RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 TFAP4Q01664 338 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 TBX2Q13207 712 aaPredicted RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms