RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PRR29P0C7W0 189 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 RHBDL3P58872 404 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 ARID5BQ14865 1188 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 SLC16A10Q8TF71 515 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 UPF1Q92900 1129 aaKnown RBP eCLIP21.21■□□□□ 0.99
COL20A1-205ENST00000471582 COA1Q9GZY4 146 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 WNT7AO00755 349 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PTGDRQ13258 359 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 ZNF174Q15697 407 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 DPP8Q6V1X1 898 aaPredicted RBP21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PIK3AP1Q6ZUJ8 805 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 SH3RF1Q7Z6J0 888 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 BLIDQ8IZY5 108 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PDILTQ8N807 584 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 DAGLBQ8NCG7 672 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 SLC44A5Q8NCS7 719 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 CCDC148Q8NFR7 591 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 SYMPKQ92797 1274 aaKnown RBP21.21■□□□□ 0.99
COL20A1-205ENST00000471582 TMEM47Q9BQJ4 181 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 ZC3H12CQ9C0D7 883 aaKnown RBP21.21■□□□□ 0.99
COL20A1-205ENST00000471582 SAP30BPQ9UHR5 308 aaKnown RBP21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PCDHA4Q9UN74 947 aa21.21■□□□□ 0.99
COL20A1-205ENST00000471582 PALM3A6NDB9 673 aaPredicted RBP21.2■□□□□ 0.98
COL20A1-205ENST00000471582 ATP1A3P13637 1013 aa21.2■□□□□ 0.98
COL20A1-205ENST00000471582 CDK8P49336 464 aa21.2■□□□□ 0.98
COL20A1-205ENST00000471582 NOM1Q5C9Z4 860 aaKnown RBP21.2■□□□□ 0.98
COL20A1-205ENST00000471582 ARL6IP4Q66PJ3 421 aaKnown RBP21.2■□□□□ 0.98
COL20A1-205ENST00000471582 STAG2Q8N3U4 1231 aa21.2■□□□□ 0.98
COL20A1-205ENST00000471582 NEDD1Q8NHV4 660 aa21.2■□□□□ 0.98
COL20A1-205ENST00000471582 ENOX1Q8TC92 643 aaKnown RBP21.2■□□□□ 0.98
COL20A1-205ENST00000471582 EPSTI1Q96J88 318 aa21.2■□□□□ 0.98
COL20A1-205ENST00000471582 H0YIN7 160 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 KCNJ6P48051 423 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 TMC6Q7Z403 805 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 C2CD5Q86YS7 1000 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL20A1-205ENST00000471582 BAZ2BQ9UIF8 2168 aaKnown RBP21.19■□□□□ 0.98
COL20A1-205ENST00000471582 MYH1P12882 1939 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 A0A087X0B3 334 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
COL20A1-205ENST00000471582 UBASH3AP57075 661 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 STYK1Q6J9G0 422 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 DHX58Q96C10 678 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 EYA3Q99504 573 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 PDGFDQ9GZP0 370 aaPredicted RBP21.19■□□□□ 0.98
COL20A1-205ENST00000471582 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
COL20A1-205ENST00000471582 M0R2N6 131 aa21.18■□□□□ 0.98
COL20A1-205ENST00000471582 RIMBP2O15034 1052 aa21.18■□□□□ 0.98
COL20A1-205ENST00000471582 SERPINC1P01008 464 aa21.18■□□□□ 0.98
COL20A1-205ENST00000471582 ERCC5P28715 1186 aaPredicted RBP21.18■□□□□ 0.98
COL20A1-205ENST00000471582 SPZ1Q9BXG8 430 aa21.18■□□□□ 0.98
COL20A1-205ENST00000471582 FANCLQ9NW38 375 aa21.18■□□□□ 0.98
COL20A1-205ENST00000471582 RRP9O43818 475 aaKnown RBP21.17■□□□□ 0.98
COL20A1-205ENST00000471582 SFPQP23246 707 aaKnown RBP eCLIP21.17■□□□□ 0.98
COL20A1-205ENST00000471582 NOVP48745 357 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 GRAMD1CQ8IYS0 662 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 PAGE5Q96GU1 130 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 GSDMAQ96QA5 445 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 BARHL2Q9NY43 387 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 PLIN4Q96Q06 1357 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 VWA3AA6NCI4 1184 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 NRDCO43847 1150 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 SMARCA1P28370 1054 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 TPD52L1Q16890 204 aaPredicted RBP21.17■□□□□ 0.98
COL20A1-205ENST00000471582 ARMCX5Q6P1M9 558 aa21.17■□□□□ 0.98
COL20A1-205ENST00000471582 CYTH3O43739 400 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 ZNF18P17022 549 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 GTF2IP78347 998 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 SLC35G1Q2M3R5 365 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
COL20A1-205ENST00000471582 C16orf45Q96MC5 204 aaPredicted RBP21.16■□□□□ 0.98
COL20A1-205ENST00000471582 DAGLAQ9Y4D2 1042 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 C10orf71Q711Q0 1435 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 G3V3G9 751 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
COL20A1-205ENST00000471582 LONP1P36776 959 aaKnown RBP21.16■□□□□ 0.98
COL20A1-205ENST00000471582 DPYDQ12882 1025 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 DCAF8Q5TAQ9 597 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 IQUBQ8NA54 791 aa21.16■□□□□ 0.98
COL20A1-205ENST00000471582 STXBP3O00186 592 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 TNNT1P13805 278 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 MCM7P33993 719 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 E2F4Q16254 413 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 CFAP100Q494V2 611 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 VSTM4Q8IW00 320 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 C4orf32Q8N8J7 132 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 NFE2L3Q9Y4A8 694 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 PAXBP1Q9Y5B6 917 aa21.15■□□□□ 0.98
COL20A1-205ENST00000471582 CCDC194A0A1B0GVG4 234 aa21.14■□□□□ 0.98
COL20A1-205ENST00000471582 KLRF2D3W0D1 207 aa21.14■□□□□ 0.98
COL20A1-205ENST00000471582 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.98
COL20A1-205ENST00000471582 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.98
COL20A1-205ENST00000471582 CCAR2Q8N163 923 aaKnown RBP21.14■□□□□ 0.98
COL20A1-205ENST00000471582 CCDC12Q8WUD4 166 aaPredicted RBP21.14■□□□□ 0.98
COL20A1-205ENST00000471582 CNKSR1Q969H4 720 aa21.14■□□□□ 0.98
COL20A1-205ENST00000471582 PARP1P09874 1014 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms