RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 H0YGN5 161 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 ERCC3P19447 782 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-211ENST00000471260 CCL14Q16627 93 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 PPP4R3BQ5MIZ7 849 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
HMGN1-211ENST00000471260 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 A0A0G2JMZ2 1700 aa16.07■□□□□ 0.16
HMGN1-211ENST00000471260 MSCO60682 206 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 ADORA2AP29274 412 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 COPB2P35606 906 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 PPARAQ07869 468 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 PLS1Q14651 629 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
HMGN1-211ENST00000471260 OLFML2BQ68BL8 750 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 PPP1R9AQ9ULJ8 1098 aa16.06■□□□□ 0.16
HMGN1-211ENST00000471260 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 F5H6K3 240 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 VWA5AO00534 786 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 EVI5O60447 810 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 TTLL1O95922 423 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 IGHA2P01877 340 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 KLRC3Q07444 240 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 TMEM132BQ14DG7 1078 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 FAM83BQ5T0W9 1011 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 NCAPG2Q86XI2 1143 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 STK11IPQ8N1F8 1099 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 NEDD1Q8NHV4 660 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
HMGN1-211ENST00000471260 RAD21O60216 631 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 FCER1AP12319 257 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-211ENST00000471260 LHX8Q68G74 356 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
HMGN1-211ENST00000471260 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
HMGN1-211ENST00000471260 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 PRDM1O75626 825 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 NDUFB10O96000 172 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 STAT3P40763 770 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-211ENST00000471260 ALX1Q15699 326 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 GMCL1P1Q8NEA9 526 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 DIS3LQ8TF46 1054 aaKnown RBP16.03■□□□□ 0.16
HMGN1-211ENST00000471260 SLF1Q9BQI6 1058 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 OSBPL3Q9H4L5 887 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 FBXO28Q9NVF7 368 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
HMGN1-211ENST00000471260 COLQQ9Y215 455 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-211ENST00000471260 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
HMGN1-211ENST00000471260 TFAP4Q01664 338 aa16.02■□□□□ 0.16
HMGN1-211ENST00000471260 NUCB1Q02818 461 aa16.02■□□□□ 0.16
HMGN1-211ENST00000471260 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-211ENST00000471260 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
HMGN1-211ENST00000471260 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.16
HMGN1-211ENST00000471260 FEM1BQ9UK73 627 aa16.02■□□□□ 0.16
HMGN1-211ENST00000471260 ZNF214Q9UL59 606 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-211ENST00000471260 DIS3Q9Y2L1 958 aaKnown RBP16.02■□□□□ 0.16
HMGN1-211ENST00000471260 FOXP2O15409 715 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 COBLO75128 1261 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 FDX1P10109 184 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 CYBAP13498 195 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 CYP2C19P33261 490 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 KCTD2Q14681 263 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 MMP19Q99542 508 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 TEX13BQ9BXU2 312 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.01■□□□□ 0.15
HMGN1-211ENST00000471260 CEP290O15078 2479 aa16.01■□□□□ 0.15
HMGN1-211ENST00000471260 ZMYM6O95789 1325 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 ZBED4O75132 1171 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 IGHDP01880 384 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 FGRP09769 529 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 COL6A1P12109 1028 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
HMGN1-211ENST00000471260 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 MAML3Q96JK9 1138 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 MYH4Q9Y623 1939 aa16■□□□□ 0.15
HMGN1-211ENST00000471260 TSPY2A6NKD2 308 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 ORC4O43929 436 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 CNGA1P29973 690 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 OAZ1P54368 228 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms