RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 RIOX1Q9H6W3 641 aa29.9■■■□□ 2.38
U2AF1-208ENST00000471250 GH2P01242 217 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 ZNF445P59923 1031 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 MAP3K10Q02779 954 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 NR5A1Q13285 461 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 STK38Q15208 465 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 NPY5RQ15761 445 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 KIF4BQ2VIQ3 1234 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 TBC1D10BQ4KMP7 808 aaPredicted RBP29.89■■■□□ 2.38
U2AF1-208ENST00000471250 FRMPD2Q68DX3 1309 aaPredicted RBP29.89■■■□□ 2.38
U2AF1-208ENST00000471250 BRMS1Q9HCU9 246 aa29.89■■■□□ 2.38
U2AF1-208ENST00000471250 H7C1D1 291 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 RASA3Q14644 834 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 CDAN1Q8IWY9 1227 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 FAM177A1Q8N128 213 aaPredicted RBP29.88■■■□□ 2.37
U2AF1-208ENST00000471250 GPC2Q8N158 579 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 KCNG4Q8TDN1 519 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 CPVLQ9H3G5 476 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 NLRP5P59047 1200 aa29.88■■■□□ 2.37
U2AF1-208ENST00000471250 GPATCH4Q5T3I0 446 aaKnown RBP29.87■■■□□ 2.37
U2AF1-208ENST00000471250 RRP36Q96EU6 259 aaKnown RBP29.87■■■□□ 2.37
U2AF1-208ENST00000471250 UBA5Q9GZZ9 404 aa29.87■■■□□ 2.37
U2AF1-208ENST00000471250 CALML3P27482 149 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 DEKP35659 375 aaKnown RBP29.86■■■□□ 2.37
U2AF1-208ENST00000471250 RILPL1Q5EBL4 403 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 CCDC183Q5T5S1 534 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 WWC2Q6AWC2 1192 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 DCAF4Q8WV16 495 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 GPKOWQ92917 476 aaPredicted RBP eCLIP29.86■■■□□ 2.37
U2AF1-208ENST00000471250 TNFRSF25Q93038 417 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 HACL1Q9UJ83 578 aa29.86■■■□□ 2.37
U2AF1-208ENST00000471250 SPTLC2O15270 562 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 SLC39A14Q15043 492 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 SF3A1Q15459 793 aaKnown RBP29.85■■■□□ 2.37
U2AF1-208ENST00000471250 TEPSINQ96N21 525 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 GPCPD1Q9NPB8 672 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 BARHL2Q9NY43 387 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 GPRC5DQ9NZD1 345 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 SYNPO2Q9UMS6 1093 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 STXBP3O00186 592 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 YBX3P16989 372 aaKnown RBP eCLIP29.85■■■□□ 2.37
U2AF1-208ENST00000471250 LIG1P18858 919 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 TOB1P50616 345 aaPredicted RBP29.85■■■□□ 2.37
U2AF1-208ENST00000471250 BICD2Q8TD16 824 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 PCDHA7Q9UN72 937 aa29.85■■■□□ 2.37
U2AF1-208ENST00000471250 ASTN2O75129 1339 aaPredicted RBP29.84■■■□□ 2.37
U2AF1-208ENST00000471250 FSD2A1L4K1 749 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 ME1P48163 572 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 PTPAQ15257 358 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 SLFN13Q68D06 897 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 MIGA2Q7L4E1 593 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 GMCL1P1Q8NEA9 526 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 CCDC148Q8NFR7 591 aa29.84■■■□□ 2.37
U2AF1-208ENST00000471250 SEC63Q9UGP8 760 aaKnown RBP29.84■■■□□ 2.37
U2AF1-208ENST00000471250 ISY1Q9ULR0 285 aaKnown RBP29.84■■■□□ 2.37
U2AF1-208ENST00000471250 CCDC96Q2M329 555 aa29.83■■■□□ 2.37
U2AF1-208ENST00000471250 HEATR3Q7Z4Q2 680 aa29.83■■■□□ 2.37
U2AF1-208ENST00000471250 PIGSQ96S52 555 aa29.83■■■□□ 2.37
U2AF1-208ENST00000471250 VAT1LQ9HCJ6 419 aa29.83■■■□□ 2.37
U2AF1-208ENST00000471250 ADALQ6DHV7 355 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 GALNT17Q6IS24 598 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 TYW1BQ6NUM6 668 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 ZBTB21Q9ULJ3 1066 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 DAGLBQ8NCG7 672 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 PCDHA4Q9UN74 947 aa29.82■■■□□ 2.36
U2AF1-208ENST00000471250 SCAF8Q9UPN6 1271 aaKnown RBP29.82■■■□□ 2.36
U2AF1-208ENST00000471250 GOLGA6L3A6NEY3 463 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 hCG_1984214I3L0E3 225 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 PPP6R2O75170 966 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 CAP2P40123 477 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 EARS2Q5JPH6 523 aaKnown RBP29.81■■■□□ 2.36
U2AF1-208ENST00000471250 TTBK2Q6IQ55 1244 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 HOMER1Q86YM7 354 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 BLIDQ8IZY5 108 aa29.81■■■□□ 2.36
U2AF1-208ENST00000471250 ZNF713Q8N859 430 aaPredicted RBP29.81■■■□□ 2.36
U2AF1-208ENST00000471250 A0A1W2PQ27 194 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 A0A1W2PQ64 194 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 A0A1W2PQD8 194 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 F5H6K3 240 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 SLC1A4P43007 532 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 KLRC3Q07444 240 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 KCTD1Q719H9 257 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 GAS2L3Q86XJ1 694 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 CCAR1Q8IX12 1150 aaKnown RBP29.8■■■□□ 2.36
U2AF1-208ENST00000471250 CCDC12Q8WUD4 166 aaPredicted RBP29.8■■■□□ 2.36
U2AF1-208ENST00000471250 GMCL1Q96IK5 515 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 ARHGEF10LQ9HCE6 1279 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 RNF181Q9P0P0 153 aa29.8■■■□□ 2.36
U2AF1-208ENST00000471250 SYCE3A1L190 88 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 LETM1O95202 739 aaPredicted RBP29.79■■■□□ 2.36
U2AF1-208ENST00000471250 ADGRF4Q8IZF3 695 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 TRPM4Q8TD43 1214 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 DEFB129Q9H1M3 183 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 JMJD4Q9H9V9 463 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.79■■■□□ 2.36
U2AF1-208ENST00000471250 A0A1W2PRG0 241 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 JMYQ8N9B5 988 aa29.79■■■□□ 2.36
U2AF1-208ENST00000471250 NOL7Q9UMY1 257 aaKnown RBP29.79■■■□□ 2.36
U2AF1-208ENST00000471250 FAM205CA6NFA0 338 aa29.78■■■□□ 2.36
U2AF1-208ENST00000471250 M0R2N6 131 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms