RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 CALM1P0DP23 149 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CALM2P0DP24 149 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CALM3P0DP25 149 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
CLK2-204ENST00000471047 NUCB2P80303 420 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
CLK2-204ENST00000471047 PKP1Q13835 747 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CATIPQ7Z7H3 387 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 RAB11FIP4Q86YS3 637 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CEP95Q96GE4 821 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 MTMR4Q9NYA4 1195 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
CLK2-204ENST00000471047 CCDC196A0A1B0GTZ2 297 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 DTNBO60941 627 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 BRD1O95696 1058 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
CLK2-204ENST00000471047 IFNAR1P17181 557 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 RXRAP19793 462 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 SYT1P21579 422 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
CLK2-204ENST00000471047 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 KAT14Q9H8E8 782 aa11.47□□□□□ -0.57
CLK2-204ENST00000471047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLK2-204ENST00000471047 CPLX1O14810 134 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
CLK2-204ENST00000471047 PDCP20941 246 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 GUCY1A2P33402 732 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 JAG1P78504 1218 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 FUT2Q10981 343 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
CLK2-204ENST00000471047 RTN1Q16799 776 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
CLK2-204ENST00000471047 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 RGS22Q8NE09 1264 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 MKL1Q969V6 931 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 SHISA4Q96DD7 197 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 RBM28Q9NW13 759 aaKnown RBP11.46□□□□□ -0.57
CLK2-204ENST00000471047 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
CLK2-204ENST00000471047 MYH4Q9Y623 1939 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 STK36Q9NRP7 1315 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
CLK2-204ENST00000471047 STX6O43752 255 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 PPP1R12BO60237 982 aaPredicted RBP11.45□□□□□ -0.58
CLK2-204ENST00000471047 CDKL5O76039 1030 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 TTLL1O95922 423 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
CLK2-204ENST00000471047 NBPF12Q5TAG4 269 aaPredicted RBP11.45□□□□□ -0.58
CLK2-204ENST00000471047 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 CLEC17AQ6ZS10 378 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 SIAH1Q8IUQ4 282 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 PRO3102Q9H379 93 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
CLK2-204ENST00000471047 UNC80Q8N2C7 3258 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 MPHOSPH10O00566 681 aaKnown RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 USP2O75604 605 aaPredicted RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 SNHG28P0DPA3 235 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 GRM4Q14833 912 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 SEPT2Q15019 361 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 LARP1BQ659C4 914 aaKnown RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 TMTC3Q6ZXV5 915 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 DPF3Q92784 378 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 DDX11Q96FC9 970 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 ELP3Q9H9T3 547 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
CLK2-204ENST00000471047 CLIP2Q9UDT6 1046 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 KIF3AQ9Y496 699 aa11.44□□□□□ -0.58
CLK2-204ENST00000471047 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
CLK2-204ENST00000471047 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
CLK2-204ENST00000471047 GDF11O95390 407 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 GH2P01242 217 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 ZSCAN22P10073 491 aaPredicted RBP11.43□□□□□ -0.58
CLK2-204ENST00000471047 KIF5BP33176 963 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 CAP2P40123 477 aa11.43□□□□□ -0.58
CLK2-204ENST00000471047 MTFR1Q15390 333 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms