RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 FERMT2Q96AC1 680 aa19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 SWAP70Q9UH65 585 aa19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 YDJCA8MPS7 323 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 PICALMQ13492 652 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 BLIDQ8IZY5 108 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 FAM205CA6NFA0 338 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 PTGER2P43116 358 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 APOBEC3HQ6NTF7 200 aaKnown RBP19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 KANK3Q6NY19 840 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 CDC42EP5Q6NZY7 148 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 RSBN1LQ6PCB5 846 aaPredicted RBP19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 ZNRF3Q9ULT6 936 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 PCDHA4Q9UN74 947 aa19.37■□□□□ 0.69
SMARCD3-206ENST00000470588 KLRF2D3W0D1 207 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 PARP1P09874 1014 aaKnown RBP19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 VEGFAP15692 232 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 CDC25BP30305 580 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 JDP2Q8WYK2 163 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 CEP95Q96GE4 821 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 DDX4Q9NQI0 724 aaKnown RBP19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 PLIN4Q96Q06 1357 aa19.36■□□□□ 0.69
SMARCD3-206ENST00000470588 SMTNL1A8MU46 457 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 HLA-DOAP06340 250 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 GRIN1Q05586 938 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 CCDC148Q8NFR7 591 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 OSBPL5Q9H0X9 879 aaPredicted RBP19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 CSRNP2Q9H175 543 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 MYH8P13535 1937 aa19.35■□□□□ 0.69
SMARCD3-206ENST00000470588 CYTH3O43739 400 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 ZNF174Q15697 407 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 SLC35G1Q2M3R5 365 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 SPECC1Q5M775 1068 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 SPON1Q9HCB6 807 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 ARFGEF1Q9Y6D6 1849 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 A0A087WWV3 80 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 IGKV6D-41A0A0C4DH26 115 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 RAD17O75943 681 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 VIL1P09327 827 aaKnown RBP19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 DPCR1Q3MIW9 517 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 PIK3AP1Q6ZUJ8 805 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 METTL16Q86W50 562 aaKnown RBP19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 OGFOD1Q8N543 542 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 AOPEPQ8N6M6 819 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 BARHL2Q9NY43 387 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 MTMR4Q9NYA4 1195 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
SMARCD3-206ENST00000470588 PSMD14O00487 310 aa19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 BIN1O00499 593 aa19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 POLR2DO15514 142 aaKnown RBP19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 ATP2C1P98194 919 aaPredicted RBP19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 SPC24Q8NBT2 197 aa19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 CCDC34Q96HJ3 373 aa19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 MRFAP1L1Q96HT8 127 aa19.33■□□□□ 0.68
SMARCD3-206ENST00000470588 STXBP3O00186 592 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 TPM4P67936 248 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 PNOCQ13519 176 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 CFAP100Q494V2 611 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 PPP4R3BQ5MIZ7 849 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 DRC7Q8IY82 874 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 CCDC12Q8WUD4 166 aaPredicted RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 TMOD2Q9NZR1 351 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 SERTAD1Q9UHV2 236 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 MTMR7Q9Y216 660 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 LTBP3Q9NS15 1303 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 M0R2N6 131 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 IKBKBO14920 756 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 PTGDRQ13258 359 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 WWC2Q6AWC2 1192 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 AGBL3Q8NEM8 1001 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 GPKOWQ92917 476 aaPredicted RBP eCLIP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 RRP36Q96EU6 259 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 ZNF830Q96NB3 372 aaPredicted RBP19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 EHD4Q9H223 541 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 PCDHA5Q9Y5H7 936 aa19.32■□□□□ 0.68
SMARCD3-206ENST00000470588 BAZ2BQ9UIF8 2168 aaKnown RBP19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 COL4A5P29400 1685 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 OFD1O75665 1012 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 GOLGA8HP0CJ92 632 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 AKR1B1P15121 316 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 USP17L2Q6R6M4 530 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 IDI2Q9BXS1 227 aa19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 DHX36Q9H2U1 1008 aaKnown RBP19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 TTC12Q9H892 705 aaPredicted RBP19.31■□□□□ 0.68
SMARCD3-206ENST00000470588 WNT7AO00755 349 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 TNIP1Q15025 636 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 POSTNQ15063 836 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms