RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 GNA11P29992 359 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 PRELPP51888 382 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 FAM160A1Q05DH4 1040 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
SND1-208ENST00000470463 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
SND1-208ENST00000470463 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
SND1-208ENST00000470463 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
SND1-208ENST00000470463 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
SND1-208ENST00000470463 CUTAO60888 179 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 CAPN15O75808 1086 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 CAVIN2O95810 425 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 CEBPZQ03701 1054 aaKnown RBP12.61□□□□□ -0.39
SND1-208ENST00000470463 TRAF1Q13077 416 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
SND1-208ENST00000470463 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 RIOX1Q9H6W3 641 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 COL4A5P29400 1685 aa12.61□□□□□ -0.39
SND1-208ENST00000470463 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
SND1-208ENST00000470463 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 SYCE3A1L190 88 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 CCDC192P0DO97 292 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 CMA1P23946 247 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 CACNB3P54284 484 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ICA1Q05084 483 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ZFPM1Q8IX07 1006 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
SND1-208ENST00000470463 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 C6orf50Q9HD87 102 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 DACT1Q9NYF0 836 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
SND1-208ENST00000470463 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
SND1-208ENST00000470463 TCP10L2B9ZVM9 353 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 WNT10BO00744 389 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 LMNB1P20700 586 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 ORC2Q13416 577 aaPredicted RBP12.59□□□□□ -0.39
SND1-208ENST00000470463 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
SND1-208ENST00000470463 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 GMCL1Q96IK5 515 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 TIGD1Q96MW7 591 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 ZMYND12Q9H0C1 365 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 RNF181Q9P0P0 153 aa12.59□□□□□ -0.39
SND1-208ENST00000470463 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 H7C1D1 291 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 SLC1A4P43007 532 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 PTPAQ15257 358 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 USP17L2Q6R6M4 530 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 RBM43Q6ZSC3 357 aaKnown RBP12.58□□□□□ -0.4
SND1-208ENST00000470463 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
SND1-208ENST00000470463 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.4
SND1-208ENST00000470463 PCDHAC2Q9Y5I4 1007 aa12.58□□□□□ -0.4
SND1-208ENST00000470463 FAM237AA0A1B0GTK4 181 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 CCDC194A0A1B0GVG4 234 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 CLRN2A0PK11 232 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 STXBP3O00186 592 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 LAD1O00515 517 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 CYTH3O43739 400 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 EEF2P13639 858 aaKnown RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 LIG1P18858 919 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 NAPAP54920 295 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 HTRA3P83110 453 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms