RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 RNF26Q9BY78 433 aaPredicted RBP9.17□□□□□ -0.94
SMC4-212ENST00000470240 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
SMC4-212ENST00000470240 MYH6P13533 1939 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 MINDY4BA8MYZ0 360 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 KIF28PB7ZC32 967 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 AP5Z1O43299 807 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 GDF9O60383 454 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 TOM1O60784 492 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 DDAH1O94760 285 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 RXRAP19793 462 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 MARCKSP29966 332 aaPredicted RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 GTF2F1P35269 517 aaKnown RBP eCLIP9.16□□□□□ -0.948e-49■■■■■ 172.1
SMC4-212ENST00000470240 ITPK1Q13572 414 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 IFIT1BQ5T764 474 aaKnown RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 DHX40Q8IX18 779 aaKnown RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 DIS3L2Q8IYB7 885 aaKnown RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 FANCBQ8NB91 859 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 CTCFLQ8NI51 663 aaPredicted RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 SETDB2Q96T68 719 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 PYM1Q9BRP8 204 aaKnown RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 CRNKL1Q9BZJ0 848 aaKnown RBP9.16□□□□□ -0.94
SMC4-212ENST00000470240 FAM117AQ9C073 453 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 KCNH3Q9ULD8 1083 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 A0A1B0GUL6 1792 aa9.16□□□□□ -0.94
SMC4-212ENST00000470240 SLIT2O94813 1529 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 TNKSO95271 1327 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 SKILP12757 684 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMC4-212ENST00000470240 KRT2P35908 639 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 MYL5Q02045 173 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 SLC10A5Q5PT55 438 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
SMC4-212ENST00000470240 RC3H1Q5TC82 1133 aaKnown RBP9.15□□□□□ -0.94
SMC4-212ENST00000470240 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 NBPF5PQ86XG9 351 aaPredicted RBP9.15□□□□□ -0.94
SMC4-212ENST00000470240 CERS3Q8IU89 383 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 LRRC8AQ8IWT6 810 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 CCDC112Q8NEF3 446 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
SMC4-212ENST00000470240 MYL10Q9BUA6 226 aa9.15□□□□□ -0.94
SMC4-212ENST00000470240 ARPP21Q9UBL0 812 aaPredicted RBP9.15□□□□□ -0.94
SMC4-212ENST00000470240 DUOX1Q9NRD9 1551 aa9.15□□□□□ -0.95
SMC4-212ENST00000470240 CCDC88AQ3V6T2 1871 aa9.15□□□□□ -0.95
SMC4-212ENST00000470240 BCL9LQ86UU0 1499 aa9.15□□□□□ -0.95
SMC4-212ENST00000470240 LAMB1P07942 1786 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 MYH14Q7Z406 1995 aaKnown RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 CFAP99D6REC4 459 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 PRKAB2O43741 272 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 RANBP6O60518 1105 aaKnown RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 SERPINC1P01008 464 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 TNNT1P13805 278 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 KIF5BP33176 963 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 GSTO1P78417 241 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 PDE4BQ07343 736 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 PTPAQ15257 358 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 PTPN14Q15678 1187 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 NTRK3Q16288 839 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 QPCTQ16769 361 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 TUSC1Q2TAM9 212 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 DPCR1Q3MIW9 517 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 TPTE2Q6XPS3 522 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 KRBA2Q6ZNG9 492 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 C17orf53Q8N3J3 647 aaPredicted RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 CRACR2BQ8N4Y2 399 aaPredicted RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 AIFM3Q96NN9 605 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 ATP8A2Q9NTI2 1148 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 NARFQ9UHQ1 456 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 TUBE1Q9UJT0 475 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 HPSEQ9Y251 543 aa9.14□□□□□ -0.95
SMC4-212ENST00000470240 MORC2Q9Y6X9 1032 aaPredicted RBP9.14□□□□□ -0.95
SMC4-212ENST00000470240 MROH7-TTC4A0A0A0MT08 1334 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 FAM187AA6NFU0 413 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 TRIM75PA6NK02 468 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 BIN1O00499 593 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 HIBADHP31937 336 aaKnown RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 CTHP32929 405 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 GYG1P46976 350 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 KCNJ6P48051 423 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 RPS8P62241 208 aaKnown RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 RBM10P98175 930 aaKnown RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 SYCP1Q15431 976 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 CT47A1Q5JQC4 288 aaPredicted RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 CEP135Q66GS9 1140 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
SMC4-212ENST00000470240 CYP4X1Q8N118 509 aa9.13□□□□□ -0.95
SMC4-212ENST00000470240 CACTINQ8WUQ7 758 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms