RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 STAM2O75886 525 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 TFDP1Q14186 410 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 SRGAP1Q7Z6B7 1085 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 NME8Q8N427 588 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 AFAP1L2Q8N4X5 818 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 CCDC26Q8TAB7 109 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 GPKOWQ92917 476 aaPredicted RBP eCLIP7.8□□□□□ -1.167e-22■□□□□ 10.2
CD46-212ENST00000469535 TBC1D32Q96NH3 1257 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 OPA1O60313 960 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 DIXDC1Q155Q3 683 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 KCTD1Q719H9 257 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 ZBTB38Q8NAP3 1195 aaPredicted RBP7.8□□□□□ -1.16
CD46-212ENST00000469535 RETREG2Q8NC44 543 aa7.8□□□□□ -1.16
CD46-212ENST00000469535 UNC5CLQ8IV45 518 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 KBTBD3Q8NAB2 608 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 ZSCAN10Q96SZ4 725 aaPredicted RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 ASIC3Q9UHC3 531 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 KIAA0232Q92628 1395 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 SPDYE2BA6NHP3 402 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 SPDYE6P0CI01 402 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 HSPA4P34932 840 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 LONRF3Q496Y0 759 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 RSRC2Q7L4I2 434 aaKnown RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 DDX25Q9UHL0 483 aaKnown RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 KCNG1Q9UIX4 513 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 PRAG1Q86YV5 1406 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 AKR1B15C9JRZ8 316 aaPredicted RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 DYNC1I1O14576 645 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 BNIP3LO60238 219 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 LTKP29376 864 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 ELF1P32519 619 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 KIF11P52732 1056 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 C1orf228Q6PIY5 440 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 DISP1Q96F81 1524 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 PIK3CAP42336 1068 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 PPARDQ03181 441 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 PSMD6Q15008 389 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 ANKS4BQ8N8V4 417 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 CARD14Q9BXL6 1004 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 PRDM5Q9NQX1 630 aaPredicted RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 EIF4A1P60842 406 aaKnown RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 PPFIA1Q13136 1202 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 ELMSAN1Q6PJG2 1045 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 GREM2Q9H772 168 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 KDM3AQ9Y4C1 1321 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 MMP10P09238 476 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 GPR101Q96P66 508 aaPredicted RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 NAP1L3Q99457 506 aaPredicted RBP7.79□□□□□ -1.16
CD46-212ENST00000469535 FAM184BQ9ULE4 1060 aa7.79□□□□□ -1.16
CD46-212ENST00000469535 AFF2P51816 1311 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 ZNF335Q9H4Z2 1342 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 ZFYVE16Q7Z3T8 1539 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 INO80B-WBP1J3KQ70 363 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 M0R2C6 588 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 IGSF22Q8N9C0 903 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 INO80BQ9C086 356 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 ADD3Q9UEY8 706 aaKnown RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 PIK3C2GO75747 1445 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 MARK3P27448 753 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 CNGA4Q8IV77 575 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 EDC3Q96F86 508 aaKnown RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 ABCF3Q9NUQ8 709 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 KLRF2D3W0D1 207 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 CYP4A11Q02928 519 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 RPUSD2Q8IZ73 545 aaKnown RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 NT5C3AQ9H0P0 336 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 TAB2Q9NYJ8 693 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 NKIRAS1Q9NYS0 192 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.78□□□□□ -1.16
CD46-212ENST00000469535 V9GYY5 206 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 MUM1L1Q5H9M0 696 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 CDC37L1Q7L3B6 337 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 ZNF654Q8IZM8 581 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 RSAD2Q8WXG1 361 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 ZNF277Q9NRM2 450 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 PCDHA12Q9UN75 941 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 UTP11Q9Y3A2 253 aaKnown RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 SAT1P21673 171 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 CCND2P30279 289 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 MYL5Q02045 173 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 MIS18BP1Q6P0N0 1132 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 ARMCX5Q6P1M9 558 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 TAB3Q8N5C8 712 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 OTUD7AQ8TE49 926 aaPredicted RBP7.78□□□□□ -1.16
CD46-212ENST00000469535 NELFBQ8WX92 580 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 CCDC127Q96BQ5 260 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 PCDHA1Q9Y5I3 950 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 LRRC24Q50LG9 513 aa7.78□□□□□ -1.16
CD46-212ENST00000469535 NOL3O60936 208 aaKnown RBP7.77□□□□□ -1.16
CD46-212ENST00000469535 LACTBP83111 547 aaPredicted RBP7.77□□□□□ -1.16
CD46-212ENST00000469535 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 IFNL3Q8IZI9 196 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms