RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SLC25A27O95847 323 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-207ENST00000469093 ADCYAP1R1P41586 468 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 SNX17Q15036 470 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 LRRC41Q15345 812 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 PUS7LQ9H0K6 701 aaKnown RBP14.74□□□□□ -0.05
COL5A1-207ENST00000469093 SLC4A4Q9Y6R1 1079 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 NAV1Q8NEY1 1877 aa14.74□□□□□ -0.05
COL5A1-207ENST00000469093 VWA5AO00534 786 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 PGK2P07205 417 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 STAT3P40763 770 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 SHHQ15465 462 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 TRIM60Q495X7 471 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 FAM47AQ5JRC9 791 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 RIOX2Q8IUF8 465 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 AMOTL1Q8IY63 956 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 DDRGK1Q96HY6 314 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL5A1-207ENST00000469093 NRBP1Q9UHY1 535 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 FRMPD3Q5JV73 1810 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 SMCHD1A6NHR9 2005 aa14.73□□□□□ -0.05
COL5A1-207ENST00000469093 ZNF792Q3KQV3 632 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 C1orf53Q5VUE5 145 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
COL5A1-207ENST00000469093 SH3RF1Q7Z6J0 888 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 BADQ92934 168 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 GUCD1Q96NT3 240 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 MMP19Q99542 508 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
COL5A1-207ENST00000469093 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-207ENST00000469093 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 DIS3Q9Y2L1 958 aaKnown RBP14.72□□□□□ -0.05
COL5A1-207ENST00000469093 DNAH12Q6ZR08 3092 aa14.72□□□□□ -0.05
COL5A1-207ENST00000469093 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 TAL1P17542 331 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-207ENST00000469093 KCTD2Q14681 263 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 C9orf50Q5SZB4 431 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 FAM83BQ5T0W9 1011 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 ZSCAN25Q6NSZ9 544 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 REPS2Q8NFH8 660 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-207ENST00000469093 FAM161BQ96MY7 647 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 STRBPQ96SI9 672 aaKnown RBP14.71□□□□□ -0.05
COL5A1-207ENST00000469093 TINF2Q9BSI4 451 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 LRRCC1Q9C099 1032 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 GOPCQ9HD26 462 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-207ENST00000469093 PHF24Q9UPV7 400 aa14.71□□□□□ -0.05
COL5A1-207ENST00000469093 ZNF236Q9UL36 1845 aa14.71□□□□□ -0.06
COL5A1-207ENST00000469093 BAZ2AQ9UIF9 1905 aaKnown RBP14.7□□□□□ -0.06
COL5A1-207ENST00000469093 RAD21O60216 631 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-207ENST00000469093 PGK1P00558 417 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 ZNF865P0CJ78 1059 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-207ENST00000469093 RARBP10826 455 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 TLE2Q04725 743 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 SBK1Q52WX2 424 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 XPNPEP3Q9NQH7 507 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 PDLIM7Q9NR12 457 aa14.7□□□□□ -0.06
COL5A1-207ENST00000469093 ZNFX1Q9P2E3 1918 aaKnown RBP14.7□□□□□ -0.06
COL5A1-207ENST00000469093 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
COL5A1-207ENST00000469093 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
COL5A1-207ENST00000469093 NUP88Q99567 741 aaPredicted RBP14.69□□□□□ -0.06
COL5A1-207ENST00000469093 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
COL5A1-207ENST00000469093 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
COL5A1-207ENST00000469093 RCAN3Q9UKA8 241 aa14.69□□□□□ -0.06
COL5A1-207ENST00000469093 TACC3Q9Y6A5 838 aa14.69□□□□□ -0.06
COL5A1-207ENST00000469093 F5H6K3 240 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 RASA1P20936 1047 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 ITGB8P26012 769 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 COPB2P35606 906 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 KLRC3Q07444 240 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 C20orf194Q5TEA3 1177 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 ZNF697Q5TEC3 545 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 RNF180Q86T96 592 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 STK11IPQ8N1F8 1099 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 SEMA6BQ9H3T3 888 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 RIPK3Q9Y572 518 aa14.68□□□□□ -0.06
COL5A1-207ENST00000469093 MINDY4BA8MYZ0 360 aa14.67□□□□□ -0.06
COL5A1-207ENST00000469093 SNAI1O95863 264 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-207ENST00000469093 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
COL5A1-207ENST00000469093 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
COL5A1-207ENST00000469093 CDX2Q99626 313 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-207ENST00000469093 TEX13BQ9BXU2 312 aa14.67□□□□□ -0.06
COL5A1-207ENST00000469093 MKNK2Q9HBH9 465 aa14.67□□□□□ -0.06
COL5A1-207ENST00000469093 DNAJC25-GNG10A0A024R161 153 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 ADAMTS4O75173 837 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 NDUFB10O96000 172 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 CLTBP09497 229 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 AKR1A1P14550 325 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 EPHB4P54760 987 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
COL5A1-207ENST00000469093 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL5A1-207ENST00000469093 MSL3Q8N5Y2 521 aaKnown RBP14.66□□□□□ -0.06
COL5A1-207ENST00000469093 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
COL5A1-207ENST00000469093 LENG1Q96BZ8 264 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms