RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MDFIQ99750 246 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 SRCIN1Q9C0H9 1055 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TNMDQ9H2S6 317 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TMX1Q9H3N1 280 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 JPH1Q9HDC5 661 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 LCMT1Q9UIC8 334 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 USP32Q8NFA0 1604 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ADGRB2O60241 1585 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TTC37Q6PGP7 1564 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 NEURL4Q96JN8 1562 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 AOX1Q06278 1338 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 ADCY10Q96PN6 1610 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 GOLGA6L10A6NI86 522 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 SPDYE3A6NKU9 549 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 ADARB2-AS1A8MUL3 147 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 BECN2A8MW95 431 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 LIN7AO14910 233 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 RAB11FIP3O75154 756 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 HMMRO75330 724 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 FSBPO95073 299 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 SFPQP23246 707 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 GPTP24298 496 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 AARSP49588 968 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 SH3BGRP55822 239 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 GRIK3Q13003 919 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 TMED1Q13445 227 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 PKP1Q13835 747 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 COL9A3Q14050 684 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 STX1AQ16623 288 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 RSPO4Q2I0M5 234 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CCDC146Q8IYE0 955 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CCDC170Q8IYT3 715 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 MIPOL1Q8TD10 442 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 STK32AQ8WU08 396 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 TNFRSF25Q93038 417 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 DTNBP1Q96EV8 351 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 PNMA5Q96PV4 448 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 BPIFA3Q9BQP9 254 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 PAGR1Q9BTK6 254 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 C2orf49Q9BVC5 232 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 FUT8Q9BYC5 575 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CLSTN2Q9H4D0 955 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 ANO10Q9NW15 660 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 CHCHD3Q9NX63 227 aaKnown RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 KLK14Q9P0G3 267 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 RAB21Q9UL25 225 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 ODF2LQ9ULJ1 636 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 GPC6Q9Y625 555 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-207ENST00000468925 PTCH1Q13635 1447 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 TRAPPC8Q9Y2L5 1435 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 EFCAB6Q5THR3 1501 aa5.53□□□□□ -1.52
SF3B1-207ENST00000468925 FANCAO15360 1455 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 RAD54L2Q9Y4B4 1467 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ZNF644Q9H582 1327 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 M0R2N6 131 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ZEB2O60315 1214 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 SHOX2O60902 331 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 NEBLO76041 1014 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 TSPY4P0CV99 314 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 TSPY10P0CW01 314 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 NID1P14543 1247 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 NFKB1P19838 968 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ERCC5P28715 1186 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 HIRAP54198 1017 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 EVCP57679 992 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ELOAQ14241 798 aaKnown RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 LONRF2Q1L5Z9 754 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ZC3H12AQ5D1E8 599 aaKnown RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 NKAPLQ5M9Q1 402 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 RSRC2Q7L4I2 434 aaKnown RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 HOMER1Q86YM7 354 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 RPUSD2Q8IZ73 545 aaKnown RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 TMEM57Q8N5G2 664 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 MAB21L3Q8N8X9 362 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 C3orf20Q8ND61 904 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 CCHCR1Q8TD31 782 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 AFAP1L1Q8TED9 768 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ZBTB9Q96C00 473 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 HOOK2Q96ED9 719 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 SAAL1Q96ER3 474 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 OSBPL9Q96SU4 736 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ACTR5Q9H9F9 607 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 PDRG1Q9NUG6 133 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 CFAP45Q9UL16 551 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 SLC6A14Q9UN76 642 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 LIMCH1Q9UPQ0 1083 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 SMC3Q9UQE7 1217 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms