RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
XRN1-204ENST00000465074 TTLL1O95922 423 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 TFRCP02786 760 aaKnown RBP14.46□□□□□ -0.09
XRN1-204ENST00000465074 RGS2P41220 211 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 NCAPG2Q86XI2 1143 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 NEDD1Q8NHV4 660 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 SOCS4Q8WXH5 440 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 DEFB118Q96PH6 123 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 MOV10L1Q9BXT6 1211 aaKnown RBP14.46□□□□□ -0.09
XRN1-204ENST00000465074 SPATC1LQ9H0A9 340 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 MTMR4Q9NYA4 1195 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 CTDP1Q9Y5B0 961 aaPredicted RBP14.46□□□□□ -0.09
XRN1-204ENST00000465074 RLFQ13129 1914 aa14.46□□□□□ -0.09
XRN1-204ENST00000465074 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 HIP1O00291 1037 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 NMT2O60551 498 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 NDUFB10O96000 172 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 HMGCRP04035 888 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 GJB1P08034 283 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 ZKSCAN1P17029 563 aaPredicted RBP14.45□□□□□ -0.1
XRN1-204ENST00000465074 ALX1Q15699 326 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 CCL14Q16627 93 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 TRIB2Q92519 343 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 STX8Q9UNK0 236 aa14.45□□□□□ -0.1
XRN1-204ENST00000465074 IGKV6D-41A0A0C4DH26 115 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 ERCC3P19447 782 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 PTPREP23469 700 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
XRN1-204ENST00000465074 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 MORN1Q5T089 497 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 SLFN13Q68D06 897 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 DPP9Q86TI2 863 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 TICAM2Q86XR7 235 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 NKX2-3Q8TAU0 364 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 U2AF1L4Q8WU68 220 aaKnown RBP14.44□□□□□ -0.1
XRN1-204ENST00000465074 HMX1Q9NP08 348 aaPredicted RBP14.44□□□□□ -0.1
XRN1-204ENST00000465074 ANAPC4Q9UJX5 808 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 TACC3Q9Y6A5 838 aa14.44□□□□□ -0.1
XRN1-204ENST00000465074 SLC15A5A6NIM6 579 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
XRN1-204ENST00000465074 GJA8P48165 433 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 MFSD6Q6ZSS7 791 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 CPXCR1Q8N123 301 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.43□□□□□ -0.1
XRN1-204ENST00000465074 PPP1R9AQ9ULJ8 1098 aa14.43□□□□□ -0.1
XRN1-204ENST00000465074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
XRN1-204ENST00000465074 A0A0G2JMZ2 1700 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 VWA5AO00534 786 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 ZNF213O14771 459 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 SGPL1O95470 568 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 XRCC5P13010 732 aaKnown RBP14.42□□□□□ -0.1
XRN1-204ENST00000465074 GSPT1P15170 499 aaKnown RBP14.42□□□□□ -0.1
XRN1-204ENST00000465074 MCCP23508 829 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 TRMT44Q8IYL2 757 aaKnown RBP14.42□□□□□ -0.1
XRN1-204ENST00000465074 USP6NLQ92738 828 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 MKL1Q969V6 931 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 SHISA4Q96DD7 197 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 APBA2Q99767 749 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 MROH8Q9H579 483 aa14.42□□□□□ -0.1
XRN1-204ENST00000465074 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 ZNFX1Q9P2E3 1918 aaKnown RBP14.41□□□□□ -0.1
XRN1-204ENST00000465074 TMEM232C9JQI7 657 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 ORC4O43929 436 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 ZBED4O75132 1171 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 FCER1AP12319 257 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 BMP3P12645 472 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 ADORA2AP29274 412 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 CNGA1P29973 690 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 STAT3P40763 770 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 CACNB2Q08289 660 aaPredicted RBP14.41□□□□□ -0.1
XRN1-204ENST00000465074 MFSD14CQ5VZR4 134 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
XRN1-204ENST00000465074 IL17RBQ9NRM6 502 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 BRCA2P51587 3418 aa14.41□□□□□ -0.1
XRN1-204ENST00000465074 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 STRNO43815 780 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 SLC25A27O95847 323 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 CCND3P30281 292 aaPredicted RBP14.4□□□□□ -0.1
XRN1-204ENST00000465074 SLC1A4P43007 532 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 GRB14Q14449 540 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 CCDC96Q2M329 555 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 PPP4R3BQ5MIZ7 849 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 SNRNP48Q6IEG0 339 aaKnown RBP14.4□□□□□ -0.1
XRN1-204ENST00000465074 KCTD1Q719H9 257 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 NPLOC4Q8TAT6 608 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 DPF3Q92784 378 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 MMP19Q99542 508 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 ZKSCAN3Q9BRR0 538 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 FLRT1Q9NZU1 646 aa14.4□□□□□ -0.1
XRN1-204ENST00000465074 FEM1BQ9UK73 627 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms