RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
USP42-205ENST00000465073 KBTBD3Q8NAB2 608 aa27.3■■□□□ 1.96
USP42-205ENST00000465073 MAML3Q96JK9 1138 aa27.3■■□□□ 1.96
USP42-205ENST00000465073 FBXO28Q9NVF7 368 aa27.3■■□□□ 1.96
USP42-205ENST00000465073 FRMPD3Q5JV73 1810 aa27.3■■□□□ 1.96
USP42-205ENST00000465073 VWA5AO00534 786 aa27.29■■□□□ 1.96
USP42-205ENST00000465073 ATN1P54259 1190 aaPredicted RBP27.29■■□□□ 1.96
USP42-205ENST00000465073 MDM2Q00987 491 aaPredicted RBP27.29■■□□□ 1.96
USP42-205ENST00000465073 GJC2Q5T442 439 aaPredicted RBP27.29■■□□□ 1.96
USP42-205ENST00000465073 RIOX2Q8IUF8 465 aa27.29■■□□□ 1.96
USP42-205ENST00000465073 LBHD1Q9BQE6 289 aaPredicted RBP27.29■■□□□ 1.96
USP42-205ENST00000465073 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.29■■□□□ 1.96
USP42-205ENST00000465073 PPP1R9AQ9ULJ8 1098 aa27.29■■□□□ 1.96
USP42-205ENST00000465073 MYH7P12883 1935 aa27.28■■□□□ 1.96
USP42-205ENST00000465073 GSG1L2A8MUP6 293 aa27.28■■□□□ 1.96
USP42-205ENST00000465073 KBTBD13C9JR72 458 aa27.28■■□□□ 1.96
USP42-205ENST00000465073 MMP19Q99542 508 aa27.28■■□□□ 1.96
USP42-205ENST00000465073 NRBP1Q9UHY1 535 aa27.28■■□□□ 1.96
USP42-205ENST00000465073 RAD21O60216 631 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 STAT3P40763 770 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 PRAMEF19Q5SWL8 479 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 DEFB123Q8N688 67 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 APPBP2Q92624 585 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 MKNK2Q9HBH9 465 aa27.27■■□□□ 1.96
USP42-205ENST00000465073 DNAH12Q6ZR08 3092 aa27.26■■□□□ 1.96
USP42-205ENST00000465073 RNF113AO15541 343 aaKnown RBP27.26■■□□□ 1.95
USP42-205ENST00000465073 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.95
USP42-205ENST00000465073 COPB2P35606 906 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 RTP1P59025 263 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 FAM83BQ5T0W9 1011 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 ANO1Q5XXA6 986 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 OSBP2Q969R2 916 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 PRKAG2Q9UGJ0 569 aa27.26■■□□□ 1.95
USP42-205ENST00000465073 DIS3Q9Y2L1 958 aaKnown RBP27.26■■□□□ 1.95
USP42-205ENST00000465073 RASA1P20936 1047 aa27.25■■□□□ 1.95
USP42-205ENST00000465073 KCTD2Q14681 263 aa27.25■■□□□ 1.95
USP42-205ENST00000465073 NYAP2Q9P242 653 aa27.25■■□□□ 1.95
USP42-205ENST00000465073 MINDY4BA8MYZ0 360 aa27.25■■□□□ 1.95
USP42-205ENST00000465073 SLC39A5Q6ZMH5 540 aa27.25■■□□□ 1.95
USP42-205ENST00000465073 ZNF214Q9UL59 606 aaPredicted RBP27.25■■□□□ 1.95
USP42-205ENST00000465073 GNAT2P19087 354 aa27.24■■□□□ 1.95
USP42-205ENST00000465073 SLC17A8Q8NDX2 589 aa27.24■■□□□ 1.95
USP42-205ENST00000465073 REPS2Q8NFH8 660 aa27.24■■□□□ 1.95
USP42-205ENST00000465073 ROBO3Q96MS0 1386 aa27.24■■□□□ 1.95
USP42-205ENST00000465073 PGK2P07205 417 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 LRRC41Q15345 812 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 LRRFIP1Q32MZ4 808 aaKnown RBP27.23■■□□□ 1.95
USP42-205ENST00000465073 ZNF792Q3KQV3 632 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 SLF1Q9BQI6 1058 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 ZNF287Q9HBT7 754 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 ATP11BQ9Y2G3 1177 aa27.23■■□□□ 1.95
USP42-205ENST00000465073 PARP14Q460N5 1801 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 F5H6K3 240 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 MYCNP04198 464 aaPredicted RBP27.22■■□□□ 1.95
USP42-205ENST00000465073 KLRC3Q07444 240 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 TSHZ3Q63HK5 1081 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 STK11IPQ8N1F8 1099 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 TINF2Q9BSI4 451 aa27.22■■□□□ 1.95
USP42-205ENST00000465073 GPAA1O43292 621 aa27.21■■□□□ 1.95
USP42-205ENST00000465073 NUP88Q99567 741 aaPredicted RBP27.21■■□□□ 1.95
USP42-205ENST00000465073 RARBP10826 455 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 ADCYAP1R1P41586 468 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 TDO2P48775 406 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 SNX17Q15036 470 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 FAM47AQ5JRC9 791 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 Q7L0L9 218 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 ZNF444Q8N0Y2 327 aaPredicted RBP27.2■■□□□ 1.95
USP42-205ENST00000465073 TEX13BQ9BXU2 312 aa27.2■■□□□ 1.95
USP42-205ENST00000465073 NDUFB10O96000 172 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 APPP05067 770 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 PRPF38AQ8NAV1 312 aaKnown RBP27.19■■□□□ 1.94
USP42-205ENST00000465073 EPB41L4AQ9HCS5 686 aaPredicted RBP27.19■■□□□ 1.94
USP42-205ENST00000465073 XPNPEP3Q9NQH7 507 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 MTMR10Q9NXD2 777 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 CLIP2Q9UDT6 1046 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 IGKV6D-41A0A0C4DH26 115 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 PATL2C9JE40 543 aaKnown RBP27.19■■□□□ 1.94
USP42-205ENST00000465073 C1orf53Q5VUE5 145 aa27.19■■□□□ 1.94
USP42-205ENST00000465073 GREB1LQ9C091 1923 aaPredicted RBP27.18■■□□□ 1.94
USP42-205ENST00000465073 ZNFX1Q9P2E3 1918 aaKnown RBP27.18■■□□□ 1.94
USP42-205ENST00000465073 M0R2C6 588 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 TRIM60Q495X7 471 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 SNRNP48Q6IEG0 339 aaKnown RBP27.18■■□□□ 1.94
USP42-205ENST00000465073 MSL3Q8N5Y2 521 aaKnown RBP27.18■■□□□ 1.94
USP42-205ENST00000465073 MKL1Q969V6 931 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 FERMT2Q96AC1 680 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 SYNPO2Q9UMS6 1093 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 PHF24Q9UPV7 400 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 STXBP5LQ9Y2K9 1186 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 COL6A3P12111 3177 aa27.18■■□□□ 1.94
USP42-205ENST00000465073 COL11A1P12107 1806 aaPredicted RBP27.18■■□□□ 1.94
USP42-205ENST00000465073 TTC41PQ6P2S7 1318 aa27.17■■□□□ 1.94
USP42-205ENST00000465073 ERC2O15083 957 aa27.17■■□□□ 1.94
USP42-205ENST00000465073 RNF180Q86T96 592 aa27.17■■□□□ 1.94
USP42-205ENST00000465073 NACAP1Q9BZK3 213 aa27.17■■□□□ 1.94
USP42-205ENST00000465073 CNPY2Q9Y2B0 182 aa27.17■■□□□ 1.94
USP42-205ENST00000465073 ATP2A1O14983 1001 aa27.16■■□□□ 1.94
USP42-205ENST00000465073 TAL1P17542 331 aaPredicted RBP27.16■■□□□ 1.94
USP42-205ENST00000465073 IFNL3Q8IZI9 196 aa27.16■■□□□ 1.94
USP42-205ENST00000465073 MTMR4Q9NYA4 1195 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms