RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
RPP40-203ENST00000464646 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
RPP40-203ENST00000464646 TRIOBPQ9H2D6 2365 aa16.51■□□□□ 0.23
RPP40-203ENST00000464646 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
RPP40-203ENST00000464646 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 COL11A1P12107 1806 aaPredicted RBP16.5■□□□□ 0.23
RPP40-203ENST00000464646 MSCO60682 206 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
RPP40-203ENST00000464646 PRAMEF19Q5SWL8 479 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 LHX8Q68G74 356 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
RPP40-203ENST00000464646 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
RPP40-203ENST00000464646 PFASO15067 1338 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 COBLO75128 1261 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 SLC25A27O95847 323 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
RPP40-203ENST00000464646 HOXC6P09630 235 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 RASA1P20936 1047 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
RPP40-203ENST00000464646 KCTD2Q14681 263 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 TMEM132BQ14DG7 1078 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 GJC2Q5T442 439 aaPredicted RBP16.49■□□□□ 0.23
RPP40-203ENST00000464646 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
RPP40-203ENST00000464646 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 SEC62Q99442 399 aaKnown RBP16.49■□□□□ 0.23
RPP40-203ENST00000464646 NAPBQ9H115 298 aa16.49■□□□□ 0.23
RPP40-203ENST00000464646 FRMPD3Q5JV73 1810 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
RPP40-203ENST00000464646 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 TSPY3P0CV98 308 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 TSPY8P0CW00 308 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 MX1P20591 662 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 STAT3P40763 770 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 PDE4BQ07343 736 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 LRRC26Q2I0M4 334 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
RPP40-203ENST00000464646 PRKAG2Q9UGJ0 569 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 MYH4Q9Y623 1939 aa16.48■□□□□ 0.23
RPP40-203ENST00000464646 RLFQ13129 1914 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 VWA5AO00534 786 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 PGK2P07205 417 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
RPP40-203ENST00000464646 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
RPP40-203ENST00000464646 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 TRPV1Q8NER1 839 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
RPP40-203ENST00000464646 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
RPP40-203ENST00000464646 F5H6K3 240 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 ZBED4O75132 1171 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 CYBAP13498 195 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
RPP40-203ENST00000464646 KLRC3Q07444 240 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 FAM47AQ5JRC9 791 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 RIOX2Q8IUF8 465 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 LRRC47Q8N1G4 583 aaKnown RBP16.46■□□□□ 0.23
RPP40-203ENST00000464646 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
RPP40-203ENST00000464646 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 MTMR7Q9Y216 660 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 ATP11BQ9Y2G3 1177 aa16.46■□□□□ 0.23
RPP40-203ENST00000464646 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 PARP14Q460N5 1801 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 NDUFB10O96000 172 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
RPP40-203ENST00000464646 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 MAML3Q96JK9 1138 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 TOMM22Q9NS69 142 aa16.45■□□□□ 0.22
RPP40-203ENST00000464646 A0A1W2PPC1 479 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 DNM1LO00429 736 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 SEPT4O43236 478 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 TTLL1O95922 423 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 COL6A1P12109 1028 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 COPB2P35606 906 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 TFAP4Q01664 338 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 PPARAQ07869 468 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 ABRAQ8N0Z2 381 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 CEP95Q96GE4 821 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 GDF15Q99988 308 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPP40-203ENST00000464646 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
RPP40-203ENST00000464646 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
RPP40-203ENST00000464646 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
RPP40-203ENST00000464646 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
RPP40-203ENST00000464646 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
RPP40-203ENST00000464646 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
RPP40-203ENST00000464646 PRO3102Q9H379 93 aa16.43■□□□□ 0.22
RPP40-203ENST00000464646 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
RPP40-203ENST00000464646 SMCHD1A6NHR9 2005 aa16.43■□□□□ 0.22
RPP40-203ENST00000464646 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms