RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TTLL1O95922 423 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 NUDT12Q9BQG2 462 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 RNF208Q9H0X6 261 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 A0A0G2JMZ2 1700 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
XRN1-203ENST00000463916 CCNA1P78396 465 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 TMEM132BQ14DG7 1078 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 WDR78Q5VTH9 848 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 TRIB2Q92519 343 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 SPATC1LQ9H0A9 340 aa15.39■□□□□ 0.05
XRN1-203ENST00000463916 TSPY2A6NKD2 308 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 HIP1O00291 1037 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 ORC4O43929 436 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 UBXN2AP68543 259 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 CCL14Q16627 93 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 TBC1D10CQ8IV04 446 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 CHMP4CQ96CF2 233 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 PPP1R9AQ9ULJ8 1098 aa15.38■□□□□ 0.05
XRN1-203ENST00000463916 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
XRN1-203ENST00000463916 RRP12Q5JTH9 1297 aaKnown RBP15.37■□□□□ 0.05
XRN1-203ENST00000463916 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 SHISA4Q96DD7 197 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 VWA5AO00534 786 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 XRCC5P13010 732 aaKnown RBP15.37■□□□□ 0.05
XRN1-203ENST00000463916 ERCC3P19447 782 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 PTPREP23469 700 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 PLS1Q14651 629 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 GMCL1P1Q8NEA9 526 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
XRN1-203ENST00000463916 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
XRN1-203ENST00000463916 GJB1P08034 283 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 NOVP48745 357 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 RASGRP2Q7LDG7 609 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 TOMM22Q9NS69 142 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 PDE4DIPQ5VU43 2346 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 HMGCRP04035 888 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 CHMLP26374 656 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 GJA8P48165 433 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 GRB14Q14449 540 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 AKNAD1Q5T1N1 836 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 SLFN13Q68D06 897 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 CWC22Q9HCG8 908 aaKnown RBP15.36■□□□□ 0.05
XRN1-203ENST00000463916 FLRT1Q9NZU1 646 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
XRN1-203ENST00000463916 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
XRN1-203ENST00000463916 SLC15A5A6NIM6 579 aa15.35■□□□□ 0.05
XRN1-203ENST00000463916 RGS2P41220 211 aa15.35■□□□□ 0.05
XRN1-203ENST00000463916 STAG1Q8WVM7 1258 aa15.35■□□□□ 0.05
XRN1-203ENST00000463916 SLF1Q9BQI6 1058 aa15.35■□□□□ 0.05
XRN1-203ENST00000463916 DSCC1Q9BVC3 393 aa15.35■□□□□ 0.05
XRN1-203ENST00000463916 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
XRN1-203ENST00000463916 NEDD4P46934 1319 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 ZNF213O14771 459 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 MFSD6Q6ZSS7 791 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 NCAPG2Q86XI2 1143 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 SHCBP1Q8NEM2 672 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 U2AF1L4Q8WU68 220 aaKnown RBP15.34■□□□□ 0.05
XRN1-203ENST00000463916 DEFB118Q96PH6 123 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 MCCP23508 829 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
XRN1-203ENST00000463916 APBA2Q99767 749 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 IVNS1ABPQ9Y6Y0 642 aa15.34■□□□□ 0.05
XRN1-203ENST00000463916 DNAH12Q6ZR08 3092 aa15.33■□□□□ 0.05
XRN1-203ENST00000463916 COBLO75128 1261 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 SGPL1O95470 568 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 BMP3P12645 472 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 ADORA2AP29274 412 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 STAT3P40763 770 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 CACNB2Q08289 660 aaPredicted RBP15.33■□□□□ 0.04
XRN1-203ENST00000463916 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 CENPQQ7L2Z9 268 aaPredicted RBP15.33■□□□□ 0.04
XRN1-203ENST00000463916 KIFC2Q96AC6 838 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 MROH8Q9H579 483 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 RIPK3Q9Y572 518 aa15.33■□□□□ 0.04
XRN1-203ENST00000463916 STRNO43815 780 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 HOXC6P09630 235 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
XRN1-203ENST00000463916 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
XRN1-203ENST00000463916 PTH1RQ03431 593 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 RIOX2Q8IUF8 465 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 GMCL1Q96IK5 515 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
XRN1-203ENST00000463916 TCP11L1Q9NUJ3 509 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 MTMR7Q9Y216 660 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 RPTORQ8N122 1335 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 TMEM232C9JQI7 657 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 IGHA2P01877 340 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 KCTD1Q719H9 257 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 ZKSCAN3Q9BRR0 538 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 FEM1BQ9UK73 627 aa15.32■□□□□ 0.04
XRN1-203ENST00000463916 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
XRN1-203ENST00000463916 PCP11498 1178 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms