RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 TM4SF1P30408 202 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 KIF5BP33176 963 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 IARSP41252 1262 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 AKAP17AQ02040 695 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 SSRP1Q08945 709 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 APOBRQ0VD83 1088 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 ST3GAL1Q11201 340 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NFIXQ14938 502 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 MAP3K11Q16584 847 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 TMEM67Q5HYA8 995 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CT47A1Q5JQC4 288 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NFXL1Q6ZNB6 911 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CDC37L1Q7L3B6 337 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 DGKHQ86XP1 1220 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 DZIP1Q86YF9 867 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC125Q86Z20 511 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 SP8Q8IXZ3 490 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC116Q8IYX3 515 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 LINC00528Q8N1L1 170 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 MEIOBQ8N635 442 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 ZNF713Q8N859 430 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 TDRD7Q8NHU6 1098 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GPT2Q8TD30 523 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 ANKS1AQ92625 1134 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GPKOWQ92917 476 aaPredicted RBP eCLIP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 PDLIM2Q96JY6 352 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC85AQ96PX6 553 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 RIOK1Q9BRS2 568 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 MRIQ9BWK5 157 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GTPBP4Q9BZE4 634 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 COA1Q9GZY4 146 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NAT10Q9H0A0 1025 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 VPS33BQ9H267 617 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 FOXP1Q9H334 677 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 TCP11L1Q9NUJ3 509 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 RTEL1Q9NZ71 1219 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 ANKIB1Q9P2G1 1089 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 ORC3Q9UBD5 711 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GGA1Q9UJY5 639 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 RCOR1Q9UKL0 485 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 WWC3Q9ULE0 1092 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 A0A1B0GUL6 1792 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 EP400Q96L91 3159 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 UBR3Q6ZT12 1888 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 FAM205AQ6ZU69 1335 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 IRS2Q9Y4H2 1338 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 GOLGA8AA7E2F4 631 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 KINO60870 393 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 SERPINB2P05120 415 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CPA1P15085 419 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 U2AF2P26368 475 aaKnown RBP eCLIP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CALML3P27482 149 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 TRAPPC10P48553 1259 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 ANTXR2P58335 489 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 HDLBPQ00341 1268 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 DNM1Q05193 864 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 ORC2Q13416 577 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 GNL2Q13823 731 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 SKIV2LQ15477 1246 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 ZRSR1Q15695 479 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 RTN1Q16799 776 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 PRR5LQ6MZQ0 368 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 KANK3Q6NY19 840 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 PDXDC2PQ6P474 469 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 TBC1D10CQ8IV04 446 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 NECAB1Q8N987 351 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 SUPT20HQ8NEM7 779 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CTCFLQ8NI51 663 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 BICD2Q8TD16 824 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 IGDCC4Q8TDY8 1250 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 LRRN4Q8WUT4 740 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CELF1Q92879 486 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 TIGD1Q96MW7 591 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 TSEN34Q9BSV6 310 aaKnown RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 GZF1Q9H116 711 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CLSTN2Q9H4D0 955 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 LY9Q9HBG7 655 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 EPB41L4AQ9HCS5 686 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-203ENST00000462862 SH3GLB2Q9NR46 395 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 TMEM63CQ9P1W3 806 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CCDC39Q9UFE4 941 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 ABCF2Q9UG63 623 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 SYNPO2Q9UMS6 1093 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 CNPY2Q9Y2B0 182 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 LRRC37AA6NMS7 1700 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 NRXN2Q9P2S2 1712 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 PLIN4Q96Q06 1357 aa4.77□□□□□ -1.65
ERCC4-203ENST00000462862 MROH7-TTC4A0A0A0MT08 1334 aa4.76□□□□□ -1.65
ERCC4-203ENST00000462862 GAKO14976 1311 aa4.76□□□□□ -1.65
ERCC4-203ENST00000462862 FAM237AA0A1B0GTK4 181 aa4.76□□□□□ -1.65
ERCC4-203ENST00000462862 B4E1Z4 1266 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms