RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MYO1BO43795 1136 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CCDC192P0DO97 292 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 KCNA3P22001 575 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 MARCKSP29966 332 aaPredicted RBP7.81□□□□□ -1.16
MSH2-204ENST00000461394 NFIAQ12857 509 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 RILPL1Q5EBL4 403 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 HEATR3Q7Z4Q2 680 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CKAP2LQ8IYA6 745 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 STAG2Q8N3U4 1231 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 LINC00301Q8NCQ3 95 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CCDC148Q8NFR7 591 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 ANKS1AQ92625 1134 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 RRP36Q96EU6 259 aaKnown RBP7.81□□□□□ -1.16
MSH2-204ENST00000461394 MAP3K14Q99558 947 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 PANK2Q9BZ23 570 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 RBSNQ9H1K0 784 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 VPS33BQ9H267 617 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CLSTN2Q9H4D0 955 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 VAT1LQ9HCJ6 419 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 GPCPD1Q9NPB8 672 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 CLIP2Q9UDT6 1046 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 ZNRF3Q9ULT6 936 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 PCDHA7Q9UN72 937 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 FER1L6Q2WGJ9 1857 aa7.81□□□□□ -1.16
MSH2-204ENST00000461394 SIPA1L1O43166 1804 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 CLRN2A0PK11 232 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
MSH2-204ENST00000461394 KLRF2D3W0D1 207 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 CTAGE5O15320 804 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 NR1I2O75469 434 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 TTLL1O95922 423 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 U2AF2P26368 475 aaKnown RBP eCLIP7.8□□□□□ -1.16
MSH2-204ENST00000461394 CALML3P27482 149 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 FAM160A1Q05DH4 1040 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 NR5A1Q13285 461 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 SLC39A14Q15043 492 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 PKN1Q16512 942 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 PFKFB3Q16875 520 aaPredicted RBP7.8□□□□□ -1.16
MSH2-204ENST00000461394 CERKLQ49MI3 558 aaPredicted RBP7.8□□□□□ -1.16
MSH2-204ENST00000461394 ADALQ6DHV7 355 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 CIAPIN1Q6FI81 312 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 CCDC12Q8WUD4 166 aaPredicted RBP7.8□□□□□ -1.16
MSH2-204ENST00000461394 GPKOWQ92917 476 aaPredicted RBP eCLIP7.8□□□□□ -1.16
MSH2-204ENST00000461394 TRIM44Q96DX7 344 aaPredicted RBP7.8□□□□□ -1.16
MSH2-204ENST00000461394 CCDC17Q96LX7 622 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 PHF20Q9BVI0 1012 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 IDI2Q9BXS1 227 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 EHD4Q9H223 541 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 GOLPH3LQ9H4A5 285 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 PI4KBQ9UBF8 816 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 MAD2L2Q9UI95 211 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 ARFGEF1Q9Y6D6 1849 aa7.8□□□□□ -1.16
MSH2-204ENST00000461394 CCDC194A0A1B0GVG4 234 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 A0A1B0GVL5 298 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 A0A1W2PQ27 194 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 A0A1W2PQ64 194 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 A0A1W2PQD8 194 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 DDTLA6NHG4 134 aaPredicted RBP7.79□□□□□ -1.16
MSH2-204ENST00000461394 TRIM75PA6NK02 468 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 USP17L5A8MUK1 530 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 CUTAO60888 179 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 ENTPD3O75355 529 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 GDF11O95390 407 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
MSH2-204ENST00000461394 SHMT1P34896 483 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 NAPAP54920 295 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 GABPAQ06546 454 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 FUT2Q10981 343 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 TNIP1Q15025 636 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 ABCB5Q2M3G0 1257 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 ASPRV1Q53RT3 343 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 CLEC10AQ8IUN9 316 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 FOXP4Q8IVH2 680 aaPredicted RBP7.79□□□□□ -1.16
MSH2-204ENST00000461394 PRMT6Q96LA8 375 aaPredicted RBP7.79□□□□□ -1.16
MSH2-204ENST00000461394 CSRNP1Q96S65 589 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 SDF4Q9BRK5 362 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.79□□□□□ -1.16
MSH2-204ENST00000461394 MTMR4Q9NYA4 1195 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 FAM13BQ9NYF5 915 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 ZNF70Q9UC06 446 aaPredicted RBP7.79□□□□□ -1.16
MSH2-204ENST00000461394 FAM198AQ9UFP1 575 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 PLIN4Q96Q06 1357 aa7.79□□□□□ -1.16
MSH2-204ENST00000461394 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
MSH2-204ENST00000461394 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
MSH2-204ENST00000461394 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
MSH2-204ENST00000461394 A6NJR5 290 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 PPP6R2O75170 966 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 TNNI2P48788 182 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 ICA1Q05084 483 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 TYRO3Q06418 890 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 CCDC173Q0VFZ6 552 aa7.78□□□□□ -1.16
MSH2-204ENST00000461394 IKQ13123 557 aaPredicted RBP7.78□□□□□ -1.16
MSH2-204ENST00000461394 ZNF174Q15697 407 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms