RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PPFIBP1Q86W92 1011 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 ZDHHC13Q8IUH4 622 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 LRRN4CLQ8ND94 238 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 GIMAP7Q8NHV1 300 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 SGSM3Q96HU1 749 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 FGD4Q96M96 766 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 FMNL2Q96PY5 1086 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 SLC26A8Q96RN1 970 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 FEZ1Q99689 392 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 ACSS3Q9H6R3 686 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 PRKAB1Q9Y478 270 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 FAM95CA0A1B0GW59 222 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 DNAJC6O75061 913 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 COBLO75128 1261 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 FAM153BP0C7A2 387 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 BMP3P12645 472 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 ITGA4P13612 1032 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 CYP7A1P22680 504 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 MAP4P27816 1152 aaKnown RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 GYS2P54840 703 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 ANAPC15P60006 121 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 NFKBIBQ15653 356 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 PTPROQ16827 1216 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 TMEM67Q5HYA8 995 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 ZC3H12BQ5HYM0 836 aaKnown RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 AXDND1Q5T1B0 1012 aaPredicted RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 NBPF12Q5TAG4 269 aaPredicted RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 PAOXQ6QHF9 649 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 SYNPOQ8N3V7 929 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 CRACR2BQ8N4Y2 399 aaPredicted RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 ZBTB38Q8NAP3 1195 aaPredicted RBP4.5□□□□□ -1.69
VCL-203ENST00000461383 MYRFLQ96LU7 910 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 KREMEN1Q96MU8 473 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 ASPNQ9BXN1 380 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 SEMA6CQ9H3T2 930 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 SPC25Q9HBM1 224 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 PRDM10Q9NQV6 1147 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 PCDHB12Q9Y5F1 795 aa4.5□□□□□ -1.69
VCL-203ENST00000461383 TRAV20A0A0B4J274 112 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 MED26O95402 600 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 TGFB1P01137 390 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 SSTR4P31391 388 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 IGBP1P78318 339 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 NFIAQ12857 509 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 CDK5R2Q13319 367 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 LONRF2Q1L5Z9 754 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 INTS5Q6P9B9 1019 aaKnown RBP4.49□□□□□ -1.69
VCL-203ENST00000461383 C7orf61Q8IZ16 206 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 TOP6BLQ8N6T0 577 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 ADCY4Q8NFM4 1077 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 PPP1R13LQ8WUF5 828 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 DBNDD2Q9BQY9 259 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 AARSD1Q9BTE6 412 aaKnown RBP4.49□□□□□ -1.69
VCL-203ENST00000461383 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 ASCC2Q9H1I8 757 aaPredicted RBP4.49□□□□□ -1.69
VCL-203ENST00000461383 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 C7orf69Q9H7B7 122 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 WHRNQ9P202 907 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 STOML1Q9UBI4 398 aa4.49□□□□□ -1.69
VCL-203ENST00000461383 CCDC163A0A0D9SF12 145 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 A0A1W2PQU0 124 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 CBFA2T2O43439 604 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 SLITRK5O94991 958 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 ITGAVP06756 1048 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 CD247P20963 164 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 PPP2R2AP63151 447 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 AUHQ13825 339 aaKnown RBP4.48□□□□□ -1.69
VCL-203ENST00000461383 C21orf62-AS1Q17RA5 79 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 NBPF9Q3BBW0 867 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 RNF43Q68DV7 783 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 POMZP3Q6PJE2 187 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 KIAA0907Q7Z7F0 614 aaPredicted RBP4.48□□□□□ -1.69
VCL-203ENST00000461383 DTX1Q86Y01 620 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 BVESQ8NE79 360 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 DNAJB8Q8NHS0 232 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 RIN3Q8TB24 985 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 RNF141Q8WVD5 230 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 EZH1Q92800 747 aaPredicted RBP4.48□□□□□ -1.69
VCL-203ENST00000461383 DSCC1Q9BVC3 393 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 KLHL25Q9H0H3 589 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 IFT57Q9NWB7 429 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 APEX2Q9UBZ4 518 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 KCNH3Q9ULD8 1083 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 AKT3Q9Y243 479 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 PLAAQ9Y263 795 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 ZNF451Q9Y4E5 1061 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 CD2APQ9Y5K6 639 aa4.48□□□□□ -1.69
VCL-203ENST00000461383 TRBV23-1A0A0A0MS06 115 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 PRR19A6NJB7 356 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 BTBD11A6QL63 1104 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 DYNC1LI2O43237 492 aaPredicted RBP4.47□□□□□ -1.69
VCL-203ENST00000461383 PAX4O43316 350 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 CBX7O95931 251 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 CNGA1P29973 690 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 L1CAMP32004 1257 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 PPP2R5DQ14738 602 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 TKFCQ3LXA3 575 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms