RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 SNX17Q15036 470 aa26.42■■□□□ 1.82
HMG20B-207ENST00000461099 LRRC41Q15345 812 aa26.42■■□□□ 1.82
HMG20B-207ENST00000461099 ADAMTS5Q9UNA0 930 aa26.42■■□□□ 1.82
HMG20B-207ENST00000461099 LTBP2Q14767 1821 aa26.42■■□□□ 1.82
HMG20B-207ENST00000461099 ZNFX1Q9P2E3 1918 aaKnown RBP26.41■■□□□ 1.82
HMG20B-207ENST00000461099 TRIM60Q495X7 471 aa26.41■■□□□ 1.82
HMG20B-207ENST00000461099 C16orf86Q6ZW13 317 aa26.41■■□□□ 1.82
HMG20B-207ENST00000461099 GUCD1Q96NT3 240 aa26.41■■□□□ 1.82
HMG20B-207ENST00000461099 HAUS7Q99871 368 aa26.41■■□□□ 1.82
HMG20B-207ENST00000461099 DDX19BQ9UMR2 479 aa26.41■■□□□ 1.82
HMG20B-207ENST00000461099 EEF2P13639 858 aaKnown RBP26.4■■□□□ 1.82
HMG20B-207ENST00000461099 DDRGK1Q96HY6 314 aa26.4■■□□□ 1.82
HMG20B-207ENST00000461099 FAM161BQ96MY7 647 aa26.4■■□□□ 1.82
HMG20B-207ENST00000461099 KANSL2Q9H9L4 492 aa26.4■■□□□ 1.82
HMG20B-207ENST00000461099 PRDM5Q9NQX1 630 aaPredicted RBP26.4■■□□□ 1.82
HMG20B-207ENST00000461099 NRBP1Q9UHY1 535 aa26.4■■□□□ 1.82
HMG20B-207ENST00000461099 PARP14Q460N5 1801 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 UBE3CQ15386 1083 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 SHHQ15465 462 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 FAM47AQ5JRC9 791 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 C1orf53Q5VUE5 145 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 MIER1Q8N108 512 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 FERMT2Q96AC1 680 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 MMP19Q99542 508 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 FBXO28Q9NVF7 368 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 COG6Q9Y2V7 657 aa26.39■■□□□ 1.82
HMG20B-207ENST00000461099 ZBED9Q6R2W3 1325 aa26.39■■□□□ 1.81
HMG20B-207ENST00000461099 CHGBP05060 677 aa26.38■■□□□ 1.81
HMG20B-207ENST00000461099 RIOX2Q8IUF8 465 aa26.38■■□□□ 1.81
HMG20B-207ENST00000461099 BADQ92934 168 aa26.38■■□□□ 1.81
HMG20B-207ENST00000461099 SLC4A4Q9Y6R1 1079 aa26.38■■□□□ 1.81
HMG20B-207ENST00000461099 SMCHD1A6NHR9 2005 aa26.38■■□□□ 1.81
HMG20B-207ENST00000461099 COL11A1P12107 1806 aaPredicted RBP26.37■■□□□ 1.81
HMG20B-207ENST00000461099 ZNF697Q5TEC3 545 aa26.37■■□□□ 1.81
HMG20B-207ENST00000461099 CTR9Q6PD62 1173 aa26.37■■□□□ 1.81
HMG20B-207ENST00000461099 GOPCQ9HD26 462 aa26.37■■□□□ 1.81
HMG20B-207ENST00000461099 PDLIM7Q9NR12 457 aa26.37■■□□□ 1.81
HMG20B-207ENST00000461099 DIS3Q9Y2L1 958 aaKnown RBP26.37■■□□□ 1.81
HMG20B-207ENST00000461099 VWA5AO00534 786 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 PGK2P07205 417 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 RARBP10826 455 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 STAT3P40763 770 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 C9orf50Q5SZB4 431 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 SH3RF1Q7Z6J0 888 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 TINF2Q9BSI4 451 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 XPNPEP3Q9NQH7 507 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 PPP1R9AQ9ULJ8 1098 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 PHF24Q9UPV7 400 aa26.36■■□□□ 1.81
HMG20B-207ENST00000461099 TRIM43BA6NCK2 446 aa26.35■■□□□ 1.81
HMG20B-207ENST00000461099 KCTD2Q14681 263 aa26.35■■□□□ 1.81
HMG20B-207ENST00000461099 ZNF792Q3KQV3 632 aa26.35■■□□□ 1.81
HMG20B-207ENST00000461099 TRIM43Q96BQ3 446 aaPredicted RBP26.35■■□□□ 1.81
HMG20B-207ENST00000461099 RAD21O60216 631 aa26.34■■□□□ 1.81
HMG20B-207ENST00000461099 TLE2Q04725 743 aa26.34■■□□□ 1.81
HMG20B-207ENST00000461099 ZSCAN25Q6NSZ9 544 aa26.34■■□□□ 1.81
HMG20B-207ENST00000461099 RNF180Q86T96 592 aa26.34■■□□□ 1.81
HMG20B-207ENST00000461099 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.34■■□□□ 1.81
HMG20B-207ENST00000461099 PUS7LQ9H0K6 701 aaKnown RBP26.34■■□□□ 1.81
HMG20B-207ENST00000461099 ZNF214Q9UL59 606 aaPredicted RBP26.34■■□□□ 1.81
HMG20B-207ENST00000461099 EYSQ5T1H1 3165 aa26.34■■□□□ 1.81
HMG20B-207ENST00000461099 PGK1P00558 417 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 TAL1P17542 331 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-207ENST00000461099 COPB2P35606 906 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 FAM83BQ5T0W9 1011 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 REPS2Q8NFH8 660 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.33■■□□□ 1.81
HMG20B-207ENST00000461099 CHMP4BQ9H444 224 aaKnown RBP26.33■■□□□ 1.81
HMG20B-207ENST00000461099 TACC3Q9Y6A5 838 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 MYH7P12883 1935 aa26.33■■□□□ 1.81
HMG20B-207ENST00000461099 ARPP21Q9UBL0 812 aaPredicted RBP26.32■■□□□ 1.8
HMG20B-207ENST00000461099 PLXNA1Q9UIW2 1896 aa26.32■■□□□ 1.8
HMG20B-207ENST00000461099 ZNF865P0CJ78 1059 aaPredicted RBP26.31■■□□□ 1.8
HMG20B-207ENST00000461099 SMAD3P84022 425 aaKnown RBP26.31■■□□□ 1.8
HMG20B-207ENST00000461099 SEMA6BQ9H3T3 888 aa26.31■■□□□ 1.8
HMG20B-207ENST00000461099 AKR1A1P14550 325 aa26.3■■□□□ 1.8
HMG20B-207ENST00000461099 CDX2Q99626 313 aaPredicted RBP26.3■■□□□ 1.8
HMG20B-207ENST00000461099 COL25A1Q9BXS0 654 aaPredicted RBP26.3■■□□□ 1.8
HMG20B-207ENST00000461099 LRRCC1Q9C099 1032 aa26.3■■□□□ 1.8
HMG20B-207ENST00000461099 ROBO3Q96MS0 1386 aa26.3■■□□□ 1.8
HMG20B-207ENST00000461099 CLTBP09497 229 aa26.29■■□□□ 1.8
HMG20B-207ENST00000461099 SBK1Q52WX2 424 aa26.29■■□□□ 1.8
HMG20B-207ENST00000461099 STRBPQ96SI9 672 aaKnown RBP26.29■■□□□ 1.8
HMG20B-207ENST00000461099 SLF1Q9BQI6 1058 aa26.29■■□□□ 1.8
HMG20B-207ENST00000461099 CNPY2Q9Y2B0 182 aa26.29■■□□□ 1.8
HMG20B-207ENST00000461099 A0A1W2PQ45 241 aaPredicted RBP26.28■■□□□ 1.8
HMG20B-207ENST00000461099 A0A1W2PQY0 241 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 RASA1P20936 1047 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 ITGB8P26012 769 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 MSL3Q8N5Y2 521 aaKnown RBP26.28■■□□□ 1.8
HMG20B-207ENST00000461099 NUP88Q99567 741 aaPredicted RBP26.28■■□□□ 1.8
HMG20B-207ENST00000461099 TEX13BQ9BXU2 312 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 MKNK2Q9HBH9 465 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 NYAP2Q9P242 653 aa26.28■■□□□ 1.8
HMG20B-207ENST00000461099 KIAA0355O15063 1070 aa26.27■■□□□ 1.8
HMG20B-207ENST00000461099 TSEN34Q9BSV6 310 aaKnown RBP26.27■■□□□ 1.8
HMG20B-207ENST00000461099 PRUNE2Q8WUY3 3088 aa26.27■■□□□ 1.8
HMG20B-207ENST00000461099 CDH23Q9H251 3354 aa26.26■■□□□ 1.79
HMG20B-207ENST00000461099 GSG1L2A8MUP6 293 aa26.26■■□□□ 1.79
HMG20B-207ENST00000461099 F5H6K3 240 aa26.26■■□□□ 1.79
HMG20B-207ENST00000461099 SMARCA5O60264 1052 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms